Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00305 ATGTCTGTTGAACTCAAGTTCTCTCGTTCCAATCGTATCTATCGCCCTTCGGAAGCTCTGGAAGGCAAAATCGTTGTCAAAACTCACTCTTCAATTTCCCACTATGGAATTCGCCTTACTGTCAAAGGATCCGTCAACTTACAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAATCATTCTATGGCGCTATTAAGCCGATCCCAATTGTGAATAGGACCATTGAGGTTAAACCTTCTGGAAAGATTGGTTCGGGTACATCAGAGATACCATTCTCATTGAATCTTAGACAGCGGGATGAAAATTTAGAAAGATTTTATGAGACTTTCCATGGTACAGATATTAGTATCCAGTATTTGGCAACTGTAGATATATCTCGTGGATACTTGCATAAATCATTATCAGCAACAACGGAGTTCATTGTTGAAAGTGATAAAGCTGATCTTCTACAAAGACCACTTTCTCCAGAGATGGTAATCTTTTACATTACCCAAGACACTCAAAGGCATCCTCTACTCCCTGAAATAAAATCTGGTGGATTTCGGGTGACCGGAAAAATCTCTACTCAATGTTCTTTGTCTGGTCCTATTAATGGCGAGTTAACTGTTGAAGCATCTGCAGTTCCAATTCAGACAATTGACCTTCAGTTGTTTAGAGTCGAGTCCATTCTTCTTGGGGACAAAATTGTGACAGAAACCTCTCTGGTTCAAACAACACAGATAGCAGATGGAGATGTATGCCGGAATCTGACATTGCCTATTTATGTAATACTACCGCGTCTTTTGACCTGTCCAACAACCTTAGCTGGTCCCTTCTCAATTGAGTTCAAAGTTGCTATTGTCATAAGCTTTCAGTCAGAGCTAAGTAAATTGCACAAAAAATCTGATCCCAAAACACCGAGACTCTGGTTGGCAATGGAAACATTACCGCTTGAGTTGGTTCGGACAAAGTAA 951 0.409 MSVELKFSRSNRIYRPSEALEGKIVVKTHSSISHYGIRLTVKGSVNLQVRGGSAGVVESFYGAIKPIPIVNRTIEVKPSGKIGSGTSEIPFSLNLRQRDENLERFYETFHGTDISIQYLATVDISRGYLHKSLSATTEFIVESDKADLLQRPLSPEMVIFYITQDTQRHPLLPEIKSGGFRVTGKISTQCSLSGPINGELTVEASAVPIQTIDLQLFRVESILLGDKIVTETSLVQTTQIADGDVCRNLTLPIYVILPRLLTCPTTLAGPFSIEFKVAIVISFQSELSKLHKKSDPKTPRLWLAMETLPLELVRTK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00305 316 Gene3D - 183 293 IPR014752 -
Cca08g00305 316 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 3 314 IPR028934 GO:0006886
Cca08g00305 316 SUPERFAMILY E set domains 3 173 IPR014756 -
Cca08g00305 316 Gene3D - 1 144 IPR014752 -
Cca08g00305 316 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 26C 3 314 - -
Cca08g00305 316 Pfam Vacuolar protein sorting-associated protein 26 9 281 IPR028934 GO:0006886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00305 K25730 - gmx:100820593 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00305 08 4511685 4516848 Cca08g00305 08 4511685 4516848 ECH