Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00266 ATGCTTCTTAACCATATCGGCGCCGGATGCTGTTGGGTCGGCCCTCCACGACCCGACCCGAATCACAAAACCCGAATGGTCCCCGCTAGTTTTCGCCGCCGGCGGGTGTTGCCGCCGTGTCCGGCGAGGACTGCGGCGTTGAAAGGCGTACGAATGGAGAAGAGAGGCGAGAAGCGGCGATCGATATGCACCGCCGACGAGCTTCACCGCGTCTCAGTTTCGAACTCCGATTGGAAGCTCGCTCTTTGGCGCTACCTTCCTTCTCCTGAGGCCCCAGTGAGGAATCACCCGCTTTTGTTGTTGTCAGGAGTTGCCACCAATGCAATTGGCTATGATCTCTCTCCTGAGTCTTCATTTGCTCGGTACATGTCAGCGCAAGGTTTTGATACATGGACTCTCGAGGTTCGAGGTGCTGGGTTGAGCACACTTGGAGATAGGGTGGAGGAAGATGAGTGCCTCAAGAATTTTTCTGAGATTGATTCTGCTATTAATAATGACATTGGTGAAAGCAGCGCTGCTTTTGCATCAGAAGTTCGTCAAAAGAAAAGGGGAGGATCAGAGGCTATAACTAAATCTGAGGAAATGCGGTTCACAGTGAGGTTCAAGGAGATTTTTAAAAGTATGTCTGAAAGGCTTGCAGGCTTTCTCAATAGAGACTCTTTGGATGAAGGAAAGGACTCTGCATTTGTTAGTCAAATCAAGGATCTTAATCGGAGACTTCGAGCTATTATTGAAGGTCAACAGTCATTCCCAGCACAGCTTTCAGAATTGCAAGATCGTTTTGCTGCCACTCTAGAAGAGTTTCAGAAACAGTATGAGCTGATTGTCAAGTGCGATTGGGACTTTGACCATTATCTGGAAGAGGATATACCTGCTGCGATGGAGTACATAAAGGCTCAGTGCCAACCAAGGGATGGAAAATTGCTGGCGATTGGTCACTCAATGGGGGGTATCTTGTTGTATGCAAAGCTTTCACGTTGTTGTTTTGATGGAAAGGATTCTGGGTTGGCATCTATTGTTACTTTGGCGTCATCACTGGACTATACCCCTTCAAGATCATCTCTCAAGTTGCTTTTACCCCTGGTAGAACCTACTCAGGCTTTGAACATTCCTGTTATTCCAGTTGGGCCATTGATGGCTACTGCTTACCCTCTTGCAAGCTATCCTCCATATGTATTATCTTGGTTAAATTCTCAGATTTCAGCTCAAGATATGATGGATCAAAAGCTATTTGAGAAGCTTGTTTTGAACAACTTTGGTACCGTGCCTTCTAAGCTTCTCTTGCAGTTAAGAACAGTTTTCCAAGAAGGTGGTTTACGTGACAGGAGCGGAACATTCTTCTACAAGGATCATATCTACAAAAGTAAGGTTCCTGTTTTAGCGGTTGCTGGTGACCAAGACTTAATCTGCCCTCCTGAAGCTGTATATGAAACGGTAAAGCTTATTCCTGAAGAATTGGTTACATACAAAGTCTTTGGAGAGCCTGATGGTCCACACTATGCCCACTATGACTTAGTGGGTGGTCGTCTGGCAGCAGATCAACTGTATCCATGTATAACTGAATTTCTCATTTATCATGACATGGATTAG 1590 0.4604 MLLNHIGAGCCWVGPPRPDPNHKTRMVPASFRRRRVLPPCPARTAALKGVRMEKRGEKRRSICTADELHRVSVSNSDWKLALWRYLPSPEAPVRNHPLLLLSGVATNAIGYDLSPESSFARYMSAQGFDTWTLEVRGAGLSTLGDRVEEDECLKNFSEIDSAINNDIGESSAAFASEVRQKKRGGSEAITKSEEMRFTVRFKEIFKSMSERLAGFLNRDSLDEGKDSAFVSQIKDLNRRLRAIIEGQQSFPAQLSELQDRFAATLEEFQKQYELIVKCDWDFDHYLEEDIPAAMEYIKAQCQPRDGKLLAIGHSMGGILLYAKLSRCCFDGKDSGLASIVTLASSLDYTPSRSSLKLLLPLVEPTQALNIPVIPVGPLMATAYPLASYPPYVLSWLNSQISAQDMMDQKLFEKLVLNNFGTVPSKLLLQLRTVFQEGGLRDRSGTFFYKDHIYKSKVPVLAVAGDQDLICPPEAVYETVKLIPEELVTYKVFGEPDGPHYAHYDLVGGRLAADQLYPCITEFLIYHDMD 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00266 529 PANTHER LYSOSOMAL ACID LIPASE-RELATED 45 526 - -
Cca08g00266 529 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 45 526 - -
Cca08g00266 529 PIRSF UCP031088_abhydr 201 529 IPR016969 -
Cca08g00266 529 PIRSF UCP031088_abhydr 24 222 IPR016969 -
Cca08g00266 529 Gene3D alpha/beta hydrolase 267 524 IPR029058 -
Cca08g00266 529 Gene3D alpha/beta hydrolase 66 171 IPR029058 -
Cca08g00266 529 SUPERFAMILY alpha/beta-Hydrolases 71 526 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00266 Cca-Chr8 3742448 3747712 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00266 - - gmx:100808317 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00266 08 3742448 3747712 Cca08g00266 08 3742448 3747712 ECH