Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00257 ATGTTGGGGGCTGCCTTGCAATTTGGTGTTGTTCGTGGTGAGGATCGGTTTTACATTCCGGTGAAGGCGAGGAAGAACCAGAATCAGCGGAAACCGGTTCAGAGAGAGAAGGGTGGTGAAACTGAAAGTGCTGATTCAGTTTCAAAGAAGGAACTTGTTGCTTCTGAGAATGGGAATCCCAATGAATCTTCACACTCGTTGAACAAACCATCTTCTTGCCCTTCTTTAGAGGCTGTTAATAACATTGATAGGTTTCTGGAGTCAACAACTCCTTTAGTCCCAGCTCAATATTTGGCCAAGAAAACAATGAGAGGTTGGAATTGGAAGACTTGTGATGTGGAGTATCAATCGTACTTTGCTCTTGATGATCTCTGGGAATCGTTTAAGGAGTGGAGTGCATATGGAGCAGGAGTCCCTTTGGTACTTGATCAAAGACAATCTGTTGTCCAATACTATGTTCCTTATTTGTCGGCTATTCAGCTATATGGTCAATCAGATAAGAAGGCTAATGCTAAGCCAAGGTACAGTGGCGAAGATAACGATAGTGATTACTACATAGATTCAAGCAGTGACGGAAGTAGTGATAGTGAATTTGGAAAAAGGACTGAACTTTCTACAACACAAAAAAATAGTCAATATCAGATAGGTGATGCTTTGTTTCAAATGAACAGGTTGTCTGTATATGATAAACACAGTACAATGCAAGAGGGATTTTCGAGCGATGATAGTGAAACTGGGAATCCTCAAGATCTTCTTTTTGAGTATTTCGATCACACTCCTCCTTATAGCCGTGAACCATTGACCGACAAGATACTTGATCTTACACGCCACTATCCTAGCCTCAAGTCACTGAGAAGTTGTGATTTATTGCCAGCAAGTTGGATGTCTGTAGCATGGTATCCTATATATCGAATACCCACTGGTCCAACATTAAAAGATTTAGATGCTTGCTTTCTTACATACCATGCACTCCATACACCCTTGACAGGAAATGGAGGTACTCAGGCTCCAATTTTGGTTTATCCTAATGACATGGATGGTGTACCAAAGATTTCCTTACGAATTTTCGCAATGGCTTCTTATAAGTTAAAGGGATCTATTTGGATGCAAAATGGAGTTAGTGAGAGTCAACTATCAAATTCTCTCTTGCAGGCTGCAGATAACTGGTTAAGGCTGCTTCAGGTGAATCACCCGGATTATCAGTTCTTTGTTTCGCATGGCACATGCCACAGGTGA 1236 0.4134 MLGAALQFGVVRGEDRFYIPVKARKNQNQRKPVQREKGGETESADSVSKKELVASENGNPNESSHSLNKPSSCPSLEAVNNIDRFLESTTPLVPAQYLAKKTMRGWNWKTCDVEYQSYFALDDLWESFKEWSAYGAGVPLVLDQRQSVVQYYVPYLSAIQLYGQSDKKANAKPRYSGEDNDSDYYIDSSSDGSSDSEFGKRTELSTTQKNSQYQIGDALFQMNRLSVYDKHSTMQEGFSSDDSETGNPQDLLFEYFDHTPPYSREPLTDKILDLTRHYPSLKSLRSCDLLPASWMSVAWYPIYRIPTGPTLKDLDACFLTYHALHTPLTGNGGTQAPILVYPNDMDGVPKISLRIFAMASYKLKGSIWMQNGVSESQLSNSLLQAADNWLRLLQVNHPDYQFFVSHGTCHR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00257 411 MobiDBLite consensus disorder prediction 182 206 - -
Cca08g00257 411 MobiDBLite consensus disorder prediction 29 49 - -
Cca08g00257 411 PANTHER DUF789 FAMILY PROTEIN 1 411 - -
Cca08g00257 411 PANTHER T15D22.8 1 411 - -
Cca08g00257 411 Pfam Protein of unknown function (DUF789) 81 403 IPR008507 -
Cca08g00257 411 MobiDBLite consensus disorder prediction 50 73 - -
Cca08g00257 411 MobiDBLite consensus disorder prediction 22 73 - -
Cca08g00257 411 MobiDBLite consensus disorder prediction 169 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00257 Cca-Chr8 3634359 3640546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00257 - - gmx:100775751 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00257 08 3634359 3640546 Cca08g00257 08 3634359 3640546 ECH