Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00235 ATGGCTGTAGCTAGCAAAACCAGAAATATGCTTGAAGGTTTGGTTAAAGAAGGATCATTTAAATGGCTGCTTGGCAAGAAGACTTACTTTGATGAAGAATTTGAGGAGATGGAAAATTCACCTTCTGCGGGGAAGAATGTGATACGAGAGCTCTCTCCGATTGCGAACCTAGTTGTTCGTAGATGCTCAAAAATCCTTAGGACCTCTTCAAGTGAGCTTCAGGAGAGCTTCAATCAAGAGGCTTCTGACTCTATGAAGCATCCATCACGATATGCCAGGAATGTTTTGGAATATTGCTGTTTCAAGGCGCTTTTCCTGACAACACAAATGACTGGTCATCTCTTTGATAAAACATTCCGGCGCTTGACATATGACATGATGTTAGCTTGGGAGGTCCCAGCTGCTGACAGCCAACCTTTAACTAATGTCGATGAGGATATATCTGTTGGTTTAGAAGCTTTCTGTCGAATAGCTCCTTCAATTCCTATCATTGCCAATGTTATCATTAGTGAAAATCTTTTTGAGGTGCTGAGTTCTTCAACTGGTGGTCGCCTTCAGTTCCCCATTTATGATAAGTACCTCACTGGCCTAGAAAGAGCAATAAGAAAAATGAAGAGCAATTCAGAGTCATCTCTCCTGGCTGCTGTAAGATCCTCTAGAGGTGAGAAGATTCTCGAGGTTGATGGAACAGTCACAACTCAGCCAGTCCTTGAGCATGTAGGAATATCCACCTGGCCTGGTAAGTTAATGCTGACAGATCATGCACTTTATTTTGAAGCACTTCGTGTTGTATCATATGACAAACCAAAAAGATATGACTTATCAGAAGATCTTAAACAAGTTGTTAAACCTGAGTTGACTGGACCATGGGGTACTCGACTTTTTGATAAGGCAGTCTTCTATAGCTCGATATCCTTATCAGAACCAGTTGTACTAGAATTTCCTGAACTTAAAGGTCATGCTCGTCGTGATTATTGGCTAGCTATCATCCGAGAGATTCTATATGCTCACAAATTCATAAGCAATTATAGAATTAAAGGGGTTGCCCGGGATGAAGCGCTTTGGAAGGCTGTTTTAGGAATTTTGCGTTTACAAGCCATTCAGGATATTAGTTCCACAATCCCTATACAGAATGATGCTCTTCTCATGTTTAATTTATGCGATCAGCTTCCAGGTGGAGACTTGATATTAGAAACCCTTGCAAATATGCCAAACTTAAGGGAGTCAGATCATGAGAATGATTTCAAGGGTGGAAGTGGAATGTATTCTATCTCAGCCTTGGACATGGTTTCTAATTTGGGATTTGTATTTGGTGCAAGTCCAAAAAATTCAAATGAGAGCAGGATTCCTGTGGGTGAAATATCTGTTGGAGAAATGACTGCATTGGAAAGAGCGAACAATCATAAAAAGGTCATATCTGCACAAGCAACAGTTGATGGTGTTAAAGTTGATGGTATTGACACTAATTTGGCTGTTATGAAGGAGTTGCTTTTTCCTCTACATGAACTTGGGAAGTCTCTTCAATCTTTGGCTTATTGGGATGATCCATGGAAGTCTTCAGGGTTTTGTTTGTTTTCCAGTTACATCATCTACAGGGGTTGGCTTGGCTACGTGGTAGCGCTGGTGCTCATGTTACTTGCAGTTTTTATGATAATTACACGATGTTTTAGCCAAGGTAGAGGCGTTCCTGAAGTTAAAGTAATTGCCCCTCCACCTATGAATACAATGGAACAGCTTTTGGCTGTTCAGAATGCTGTCTCTCAAGCTGAACAGCTCATACAGGATGGTAACGTAATTCTGCTCAAGTTCCGCGGCTTGTTACTGTCCATTTTTCCTCAGGCCACAGAGAAGTTGGCCTTCAGTTTTCTATCAGTAGCCTTGGTTTTGGCTTTCTTGCCCATTAAATACATAGTTTTGCTACTCTTCTTGGAGACATTTACAAGATATTCACCTCCAAGAAAAGCTAGCACTGAGAGATGGATGAGGAGATTAAAGGAATGGTGGTTTAGCATACCAGCAGCTCCTGTTACACTTGAAAGAGATAAAGAGGAAAAGAAGAAAAAATAG 2067 0.4093 MAVASKTRNMLEGLVKEGSFKWLLGKKTYFDEEFEEMENSPSAGKNVIRELSPIANLVVRRCSKILRTSSSELQESFNQEASDSMKHPSRYARNVLEYCCFKALFLTTQMTGHLFDKTFRRLTYDMMLAWEVPAADSQPLTNVDEDISVGLEAFCRIAPSIPIIANVIISENLFEVLSSSTGGRLQFPIYDKYLTGLERAIRKMKSNSESSLLAAVRSSRGEKILEVDGTVTTQPVLEHVGISTWPGKLMLTDHALYFEALRVVSYDKPKRYDLSEDLKQVVKPELTGPWGTRLFDKAVFYSSISLSEPVVLEFPELKGHARRDYWLAIIREILYAHKFISNYRIKGVARDEALWKAVLGILRLQAIQDISSTIPIQNDALLMFNLCDQLPGGDLILETLANMPNLRESDHENDFKGGSGMYSISALDMVSNLGFVFGASPKNSNESRIPVGEISVGEMTALERANNHKKVISAQATVDGVKVDGIDTNLAVMKELLFPLHELGKSLQSLAYWDDPWKSSGFCLFSSYIIYRGWLGYVVALVLMLLAVFMIITRCFSQGRGVPEVKVIAPPPMNTMEQLLAVQNAVSQAEQLIQDGNVILLKFRGLLLSIFPQATEKLAFSFLSVALVLAFLPIKYIVLLLFLETFTRYSPPRKASTERWMRRLKEWWFSIPAAPVTLERDKEEKKKK 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00235 688 Pfam Plant protein of unknown function (DUF639) 466 682 IPR006927 -
Cca08g00235 688 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 1 688 - -
Cca08g00235 688 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639) 1 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00235 Cca-Chr8 3252203 3259287 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00235 - - gmx:100803163 1263.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00235 08 3252203 3259287 Cca08g00235 08 3252203 3259287 ECH