Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00221 ATGGATGATCTTTTCCAAAACAGTGGATTTAAAGGTGTTTACAAGGCTCGCACAGGGGAAGCACAAGATGGATGTGCTGTATTTTGGAAAGACAAGTTATTCAATCTTTTGCATCAAGAAGATATAGAGTTCCAAAGATTTGGCATGCGTAATAATGTTGCCCAGCTTTGTGTTTTTGAGGCAAACCATGATAAAAAAGAATTTGACTCGTGTAACGTAACAACAATGGCGCCATCCTCTGGAAAAAGAAGATTTGTAGTAGGAAATATACATGTGCTGTTCAACCCAAATCGTGGTGACATCAAACTGGGCCAGGTCAGACTTTTACTTGATAAAGCTTACAAGTTGTCGCAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTAAATAGTGTTCCACAGAGTGCCATATATAAATTTCTGTCTTCGTCAAAGTTAGACATTCAATTACATGATCGCAGAAATATGTCAGGGCAGCTTGAAGTCCAGACAAACAGAATCTTCAGATCACAGATTGGTGATGGCACTAGCATTTCAATGTCTGTTTCAAGGCAATTGCTATACAGATGGAGTTTGGAAGAACTAAGACTTGCAACTGGGGCAGAAGGAGTCACTCATCTTCAGCACCAGCTCAAACTCTGCAGTGCTTATAGTGGTGTTCCTGTAGGCCTTTTAATCTGTCAGCTATATTCCCAATTCTAA 708 0.4011 MDDLFQNSGFKGVYKARTGEAQDGCAVFWKDKLFNLLHQEDIEFQRFGMRNNVAQLCVFEANHDKKEFDSCNVTTMAPSSGKRRFVVGNIHVLFNPNRGDIKLGQVRLLLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEVQTNRIFRSQIGDGTSISMSVSRQLLYRWSLEELRLATGAEGVTHLQHQLKLCSAYSGVPVGLLICQLYSQF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00221 235 Gene3D Endonuclease/exonuclease/phosphatase 1 228 IPR036691 -
Cca08g00221 235 PANTHER PROTEIN ANGEL 2 222 - -
Cca08g00221 235 Pfam Endonuclease/Exonuclease/phosphatase family 16 143 IPR005135 GO:0003824
Cca08g00221 235 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 2 222 - -
Cca08g00221 235 SUPERFAMILY DNase I-like 8 153 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00221 Cca-Chr8 3101861 3107509 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00221 - - gmx:100777474 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00221 08 3101861 3107509 Cca08g00221 08 3101861 3107509 ECH