Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00213 ATGACAGTGAAGGCAAGCACTATTCACCATGATCTTTTGTACTTCTGCATGGTGATGAGGATCAATATTGACTGCACTGGTTGTTACAGAAAAGTGAAGAGAGCCCTTCTTGATATGCCAGAGTTGGATAGCCATCTCTTAGAGAAGAAGCAGACCAGGGTAGTTGTGTGTGGCAGGTTCATTCCACAGGACGTTGCAATCAAGATAAAGAAAAAAACTAATCGTAGAGTTGAGATTCTGGACATACAAGACATGAGTGAGAACAATGCTGAAATGGAAAACCAGAAACCAATGACCAATAGTTGGACCCTTCTAGCCACCCAGAATCAAATGGAAACATGTCATGCTTGA 351 0.4188 MTVKASTIHHDLLYFCMVMRINIDCTGCYRKVKRALLDMPELDSHLLEKKQTRVVVCGRFIPQDVAIKIKKKTNRRVEILDIQDMSENNAEMENQKPMTNSWTLLATQNQMETCHA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00213 116 Gene3D - 16 88 - -
Cca08g00213 116 PANTHER OS08G0431150 PROTEIN 11 115 - -
Cca08g00213 116 SUPERFAMILY HMA, heavy metal-associated domain 17 77 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00213 Cca-Chr8 2939191 2940377 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00213 - - gmx:100799970 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00213 08 2939191 2940377 Cca08g00213 08 2939191 2940377 ECH