Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00200 ATGTATAACGGTGAAGGTACAACACAAACACCAAAGATCAACGCTCCACCAACTGGAAAATGGACAACAGGTTTATATGATTGCTGTGACGACACTGGAAATTGTTGTCTTACATGGTGCTGTCCTCGTTTCACCTTTGGTCGGAATGTAGATATTATTGATCAAGGAAGAACATCTCCTACAATTGCACGTTTGATTTTTTTTGCCCTGGGATGTTTTGGGTTGGCAAGCTTATATACATGCGGATTCAGAAGCAAACTAAGAGCCATCTACAACTTACCAGAAGAACCATGTTCGGATTGTTGCGTTCACTATTGTTGTTTACTTTGTGCTATTTGTCAAGAGTACAGAGAACTTAAAAACCGTGGACTGGACCCCTCACAAGGTTGGAGGGCAAACGAGGAAAGACTGAGAAGAGCAAATCTAGTACCTCCACATGTTGCGCCAGCCATGACTCGCTAG 462 0.4286 MYNGEGTTQTPKINAPPTGKWTTGLYDCCDDTGNCCLTWCCPRFTFGRNVDIIDQGRTSPTIARLIFFALGCFGLASLYTCGFRSKLRAIYNLPEEPCSDCCVHYCCLLCAICQEYRELKNRGLDPSQGWRANEERLRRANLVPPHVAPAMTR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00200 153 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 20 121 IPR006461 -
Cca08g00200 153 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 12 9 149 - -
Cca08g00200 153 PANTHER DUF614 FAMILY PROTEIN-RELATED 9 149 IPR006461 -
Cca08g00200 153 Pfam PLAC8 family 21 118 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00200 Cca-Chr8 2787815 2789131 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00200 - - vra:106756366 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00200 08 2787815 2789131 Cca08g00200 08 2787815 2789131 ECH