Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02561 ATGGTTCGTGTGAAATCTCTACTCAAGGAGACGAGCATGATGACGTTTCTTGCGATTTTTCTTCTCTTATCAGACCCTTTTGGTGTTGCAAATGCAAATTCTGAAGGTGATGCTCTGTTCGCGTTGAGAAAAGCTGTGAAAGACCCAAATAACGTTCTACAGAGCTGGGATCCAACTTTGGTGGATCCTTGTACATGGTTTCATGTTACCTGTGATGATGATAAGCGAGTTACCCGACTAGACCTCGGACACGCAAAACTATCAGGCCCTTTGGTTCCAGAGCTAGGGAGGCTCCAGCGCCTTCAGTTTCTAGAATTGTACAAGAATGATTTGATTGGTCCAATACCAAAGGAACTTGGAGACCTTAAGAACCTCGTCAGCTTGGGTCTCTACCAGAACAACCTCACTGGCTCCATCCCCGCCACACTGTCCAACCTCTCCAACATCAAATTCTTGCGACTCAACAGTAACAAGCTCACCGGAAGAATACCGAGGGAACTCACTAAGTTGGCAAACCTCAAGATCTTGTCAGTCTCtcctattcatattcctatactttttaatatcccacttctctccacccattctaattcgcttttcTTTTTCAAGAATAATCCAAGACTTAAAGGACCGGAATTAATGGGATTCGTCAGATATGATACCGGAGGAAGCTGCAAATGA 681 0.4097 MVRVKSLLKETSMMTFLAIFLLLSDPFGVANANSEGDALFALRKAVKDPNNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHAKLSGPLVPELGRLQRLQFLELYKNDLIGPIPKELGDLKNLVSLGLYQNNLTGSIPATLSNLSNIKFLRLNSNKLTGRIPRELTKLANLKILSVSPIHIPILFNIPLLSTHSNSLFFFKNNPRLKGPELMGFVRYDTGGSCK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02561 226 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 17 225 - -
Cca07g02561 226 Gene3D Ribonuclease Inhibitor 31 214 IPR032675 -
Cca07g02561 226 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Cca07g02561 226 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 225 - -
Cca07g02561 226 SUPERFAMILY L domain-like 34 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02561 Cca-Chr7 54712129 54713491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02561 10 179 Receptor kinase-like Gene Family AT1G71830 57.558 4.22e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02561 - - gmx:100778819 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02561 07 54712129 54713491 Cca07g02561 07 54712129 54713491 ECH