Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02558 ATGGAAGGCTATTCTATGCCAATTGCCAAAGAAACAATTTCAAATTCTCAGGTACCCTTAGCCGCCATAACCACATCCATGAAGTTCCACAACACCTTCTCGCACATTCCAAGAGCCAAAGCGAGTGGCGATCTGATCCGGCTACTGTTTAAAGATCAAGGAAGCAAGATGTGGGGTGTTACAAGGCACAAGAGTATTCGCCCTGCCATCTCCGCATTCAGACATTTCTCTTCCCCCGCCAAAGAGGCTGGGTTTGCTGGGATTGGAGTTGGCGCTGCTTACCCTGGTCTAAGGCCTGTTATGAAGTTTATGACTTTTAACTTCTCCAAGCAGATGGGGGGTGCGTTTTGTGGGACACGGGTGATGGAGATTGTGAAGAAGCACGATTCTGGAGGTCTCGTTTGGAAGAGAATCAAGCTCACCACCACGCGTAAAGCCAATGCTAAGAAGCGTCTCCTCCGTGTCTGGCAGAATGAAGCTGTCCTGAAGGCATGTTCTGAACCGTCTTCTTCTGCCACTGCCAATGACGCTCAACACAAAGAGTAG 546 0.4927 MEGYSMPIAKETISNSQVPLAAITTSMKFHNTFSHIPRAKASGDLIRLLFKDQGSKMWGVTRHKSIRPAISAFRHFSSPAKEAGFAGIGVGAAYPGLRPVMKFMTFNFSKQMGGAFCGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPSSSATANDAQHKE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02558 181 Gene3D - 48 118 - -
Cca07g02558 181 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 66 109 IPR029061 -
Cca07g02558 181 PANTHER RIBOSOMAL PROTEIN L31-RELATED 112 179 - -
Cca07g02558 181 PANTHER RIBOSOMAL PROTEIN L31-RELATED 112 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02558 Cca-Chr7 54651828 54655803 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02558 - - ccaj:109802484 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02558 07 54651828 54655803 Cca07g02558 07 54651828 54655803 ECH