Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02556 ATGGCAATCAGTCACAGCACTTTGGCATTTGCCTTTGGCATGCTAGGTAACGTCATTTCGTTCTTGGTATTCTTGGCTCCAATACCAACATTTTACCGAATATACAAGAAGAAATCGACCCAAGAATTTCAGTCACTGCCTTACCTGGTGGCACTGTTCAGTTCCATGCTTTGGTTGTACTATGCTTTACTCAAAAAAGACGCTTTTCTTCTCTTGACCATTAACTCATTTGGGTGTGTCATAGAAACCATCTACATCATCTTGTACATCATCTATGCGTCCAGGGATGCTAGGAACTTAACTTCAAAGTTATTTTTCGCAATGAATGTGGGCTCCTTCGCTCTGATCCTCCTAGTTACACATTTTGCTGTGCATGGTGCCCTTCGTGTCCAAGTCCTTGGATGGATATGTGTTTCCCTTTCTATTAGTGTGTTTGCAGCACCATTAAGCATTGTGGCACAAGTTGTTAGGACAAAGAGTGTGGAGTTTATGCCTTTCAATTTATCATTTACCCTCACGTTGAGTGCCGTAATGTGGTTTGGTTATGGCCTCTTTCTCAAGGACATATGCATTGCTCTTCCAAATGTGCTTGGTTTTGCACTGGGGTTAATTCAAATGCTGCTCTATGGCATTTACCGGAATGGCGATAAGAAAGTTGATAAAATGGAAAAGAAGGTACCCTTAGAGCCACTAAAAAGTGTTGTTATAGCCGTGGAGGAAAAGCAGGGCAAAGAAAATAGTGAGGAGAAGGAGAAAAGCAATGAGGCTAATGATTGCCCAGTCTAA 786 0.4186 MAISHSTLAFAFGMLGNVISFLVFLAPIPTFYRIYKKKSTQEFQSLPYLVALFSSMLWLYYALLKKDAFLLLTINSFGCVIETIYIILYIIYASRDARNLTSKLFFAMNVGSFALILLVTHFAVHGALRVQVLGWICVSLSISVFAAPLSIVAQVVRTKSVEFMPFNLSFTLTLSAVMWFGYGLFLKDICIALPNVLGFALGLIQMLLYGIYRNGDKKVDKMEKKVPLEPLKSVVIAVEEKQGKENSEEKEKSNEANDCPV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02556 261 MobiDBLite consensus disorder prediction 240 261 - -
Cca07g02556 261 PANTHER RAG1-ACTIVATING PROTEIN 1 15 244 - -
Cca07g02556 261 Gene3D - 129 228 - -
Cca07g02556 261 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 15 244 - -
Cca07g02556 261 Pfam Sugar efflux transporter for intercellular exchange 131 214 IPR004316 GO:0016021
Cca07g02556 261 Pfam Sugar efflux transporter for intercellular exchange 11 95 IPR004316 GO:0016021
Cca07g02556 261 Gene3D - 11 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02556 Cca-Chr7 54588346 54590128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02556 3 236 Miscellaneous Gene Families AT5G13170 67.660 5.24e-114 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02556 K15382 - gmx:100777741 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02556 07 54588346 54590128 Cca07g02556 07 54588346 54590128 ECH