Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02396 ATGTTTCAAGAGAAGAAGAGAATGCACTACCAAGTGGAGGCTGCAGCTGCATGGAGCTACTACATGAGGGTTCGGAGCATGGAAGAGGATCAAATGGAGAGGGTGGCGAGGCTGGCTTCTCAGAGTGCTGTGGTGATTTTCAGTGTGAGTAGCTGCTGCATGTGCCATGCAATGAAGAGGCTCTTCTGTGGCATGGGAGTTAACCCTACTGTTCATGAGCTCGACCATGACCCTAAAGGCAAAGACATGGAGACTGCACTCATGAGGCTTCTTGGCAATGGATCAATCAACTCCACTGCAGTTCCTGTGGTCTTCATTGGAGGGAAGCTTGTTGGATCCATGGATAGGGTTTTGGCCTTTCACATTGGTGGCACCCTTGTTCCACTTCTCAAACAAGCTGGTGCTTTGTGGCTTTGA 417 0.4988 MFQEKKRMHYQVEAAAAWSYYMRVRSMEEDQMERVARLASQSAVVIFSVSSCCMCHAMKRLFCGMGVNPTVHELDHDPKGKDMETALMRLLGNGSINSTAVPVVFIGGKLVGSMDRVLAFHIGGTLVPLLKQAGALWL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02396 138 TIGRFAM GlrX-like_plant: glutaredoxin-like family 35 138 IPR011905 -
Cca07g02396 138 CDD GRX_GRXh_1_2_like 43 129 - -
Cca07g02396 138 SUPERFAMILY Thioredoxin-like 32 137 IPR036249 -
Cca07g02396 138 Pfam Glutaredoxin 44 111 IPR002109 -
Cca07g02396 138 PANTHER GLUTAREDOXIN 7 137 IPR011905 -
Cca07g02396 138 ProSiteProfiles Glutaredoxin domain profile. 32 137 - -
Cca07g02396 138 PANTHER GLUTAREDOXIN-C1 PROTEIN 7 137 - -
Cca07g02396 138 Gene3D Glutaredoxin 22 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02396 Cca-Chr7 52646554 52647269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02396 8 138 Miscellaneous Gene Families AT3G02000 55.882 2.01e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02396 K03676 - gmx:100818015 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02396 07 52646554 52647269 Cca07g02396 07 52646554 52647269 ECH