Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02395 ATGATGCAGATGAAGAGCACTCCATTGCACAGAACCCGTTGGGGCATGACTCAGCCTGGTTACAACAATTACAAAGCACCCTCTAAGGTGGTTACGATTCCGGTTCACTTCGTGTCCTCAGAGAGCACAAGAACCGGTTCTGCAACAAAGATTCAGAAGGTGGTGAGAGGGTTCCTTGTGAGGAACACCATGAGGAAGATAAGTGGCATGAGGGTGGAGTTGGAGCGGATCGAGAGGGAGATTAGCGTGGAAGTGTTGAGGAGGGAACAGAGAGAGAGGGTGAGGGTGGTTGAAACCATCATGAACTTGCTTCTCAAGTTGGATTCTGTTAGGGTTTTGCACTATCCTGGCCTCAGGGAGTGCAGAAAGTCTCTCATCAAAAAAGCTATTGCCCTTCAAGAAATGGTTGATCAAATTGGTGTGATTGATTCTGAGAAAGAGGGTGAGTGTGTGGGAGAAGAGAATTGTCTGAAGGATGAGGAAGCCGAGAAGAATCAGGAGGTAGATAAGGAGAAAGAGGAGGAAGAGGGTATGTGCATGGAGGAAGAATGCCTTGGCTTTGGATCAAGTTTGGTTGAGGAAAAGGACTGTGAGGAAGGTGAGGAAATTGAAGGTTTGAGAAATGAGGAGGATTGTGAAGGTGAGGAAATTGAAGCCATGGTTGGGGAGAATTGTTTGGTGAAAGACGAGGAAGGGGATTGTGAGGGTGGAAGAGATGAAGGAAAAGATAAGAGGGAGTTGTTGGAGAAGATGGTGGAGGACAATGAGAAGATGATGGAGATGATGGCACAATTGTTTCAGAGGAATGAGATACAAACAAGGCTTCTAACCTCTCTCATACAAAGAGTGGAACACCTGGAGAGAGCATTTGCTTGTGAGAAGCTGAGGAAGAAGAAAAAGAGAAATGGTGGTGCCAAAAATAGACAATCTGACCCTAGAAATGGCTTCATCGGATTCTGA 960 0.4615 MMQMKSTPLHRTRWGMTQPGYNNYKAPSKVVTIPVHFVSSESTRTGSATKIQKVVRGFLVRNTMRKISGMRVELERIEREISVEVLRREQRERVRVVETIMNLLLKLDSVRVLHYPGLRECRKSLIKKAIALQEMVDQIGVIDSEKEGECVGEENCLKDEEAEKNQEVDKEKEEEEGMCMEEECLGFGSSLVEEKDCEEGEEIEGLRNEEDCEGEEIEAMVGENCLVKDEEGDCEGGRDEGKDKRELLEKMVEDNEKMMEMMAQLFQRNEIQTRLLTSLIQRVEHLERAFACEKLRKKKKRNGGAKNRQSDPRNGFIGF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02395 319 Pfam IQ calmodulin-binding motif 47 63 IPR000048 GO:0005515
Cca07g02395 319 ProSiteProfiles IQ motif profile. 44 73 IPR000048 GO:0005515
Cca07g02395 319 Coils Coil 244 268 - -
Cca07g02395 319 Coils Coil 60 80 - -
Cca07g02395 319 SUPERFAMILY BAG domain 61 139 IPR036533 GO:0051087
Cca07g02395 319 Coils Coil 154 178 - -
Cca07g02395 319 MobiDBLite consensus disorder prediction 297 319 - -
Cca07g02395 319 Pfam BAG domain 80 138 IPR003103 GO:0051087
Cca07g02395 319 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 26 302 - -
Cca07g02395 319 ProSiteProfiles BAG domain profile. 73 140 IPR003103 GO:0051087
Cca07g02395 319 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 26 302 IPR040400 -
Cca07g02395 319 SMART BAG_1 63 140 IPR003103 GO:0051087
Cca07g02395 319 Gene3D BAG domain 39 141 IPR036533 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02395 Cca-Chr7 52640783 52642015 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02395 - - ccaj:109812378 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02395 07 52640783 52642015 Cca07g02395 07 52640783 52642015 ECH