Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02393 ATGGCGCTGAGGCTTCGTACTCTGGTCGGTCCAAGCCATTTGAGGAAACCTAGGTCGAAATTGAGGATCAGAAGTTGTGCTGTTAATGTTAGAATGGCTTTCACTGCAATTTCCAAAGTCATTGATTCTCATCTCCACGTGTGGGCTTCACCTCAAGAGGCTGGAAATTTCCCTTATTCTCCTGGACAAGAACCTACTTTACCTGGAAATGCCGATTTTTTGCTCCAGTGTATGGAGGAGGCAGGAGTAGATGGTGCACTCATTGTGCAGCCAATTAATCACAAATTTGATCATAGTTATGTCACAAGTGTTTTGAAGAAATACCCATCCAAATTTGTTGGTTGTTGCCTTGCTAATCCAGCTGATGATGGAAATGGGCTTAAGCAGTTTGAAGATCTTGTTTTGAAGGATGGTTATCGTGCTGTTCGATTCAACCCATATTTGTGGCCATCCGGGGAAAAGATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTCAATGTGCCAGTGGGCTTCATGTGTATGAAGGGGCTTGACATGCATATTTCTGAAATTGAGCAATTATGCACAGAATTTCCATCAACAGTTGTAGTGCTTGATCACTTGAGCTTTTGCAAACCACCATTAAATGATGAGGAAGGTCTTGTCTTTTCTCAACTTTTAAATCTATCTAGATTCCCACAGGTACATGTGAAATTTAGTGCCCTTTTCAGAGTGTCAAGAGTGCAGTTTCCTTATCTGGACCTGTCTCCTCTCTTATCCCAAGTTGTCTCTCACTTTGGTGCTAATCGTGTAATGTGGGGCAGCGATTTTCCATTTGTTGTTGCTGAATGTGGTTACAAAGGAGCCAAAGATGCAGTGCATCTTATTGCCAATGAGATCTCTTTGCCTTCATCAGATTTAGAGTGGATCATGGGAAAAACAGCTAAACAACTCTTCCAAAACCAATTGACTCCAGTCAAGAATTGA 981 0.42 MALRLRTLVGPSHLRKPRSKLRIRSCAVNVRMAFTAISKVIDSHLHVWASPQEAGNFPYSPGQEPTLPGNADFLLQCMEEAGVDGALIVQPINHKFDHSYVTSVLKKYPSKFVGCCLANPADDGNGLKQFEDLVLKDGYRAVRFNPYLWPSGEKMTNKVGKAIFQRAGELNVPVGFMCMKGLDMHISEIEQLCTEFPSTVVVLDHLSFCKPPLNDEEGLVFSQLLNLSRFPQVHVKFSALFRVSRVQFPYLDLSPLLSQVVSHFGANRVMWGSDFPFVVAECGYKGAKDAVHLIANEISLPSSDLEWIMGKTAKQLFQNQLTPVKN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02393 326 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 38 320 IPR032465 GO:0016831
Cca07g02393 326 Pfam Amidohydrolase 41 317 IPR006680 GO:0016787
Cca07g02393 326 SUPERFAMILY Metallo-dependent hydrolases 40 317 IPR032466 -
Cca07g02393 326 PANTHER CATALYTIC/ HYDROLASE 38 320 - -
Cca07g02393 326 Gene3D - 32 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02393 Cca-Chr7 52626972 52632044 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02393 - - pvu:PHAVU_008G016700g 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02393 07 52626972 52632044 Cca07g02393 07 52626972 52632044 ECH