Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02367 ATGGCGGGGGGGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCGCGCCGGACGCCGCGGCGGAAATAGCTCCGCCGGATCCGGCAACAACGTCGCAGCCCGGCGCCGAGATCGCCGCCCCTCCCGCTCTAGCTCCGAAGCGGCAGCGCCGACCGAGCGTCCGATTGGGCGAGATCGGTGACCAACGCGCCGCCACACACGGTCACGACTCGCACACGCGCCGCCCGAGCATGCCGCCGTGGAGCTGGCGGACTCCGAAAGAGTCTTCCAGAACCTCGAAGGCGCGGTCCGTGGCGAACCTCAACGGCGGCGAAGAGTTCGGGAACAATAACCGAAGAGGAAAAGCAAAGCGAGGAGGACCAACGACGAAGCGGTTGAGGTCGAATTGGATTCCGAGAGCAACGATCGACGAAAACGGCGACGAAGAAGGTTTTAGGGATTTcgaacacgaacacgagcacgaacatggacacgatcaGAGTCCGGTACACTCGGTGGAAGAGAACGGTGTTGATTATTGGCACGTGGATCGGAACGAGGATCCTAGGGTTAGGGTTTCGGACAACGAAGGCGTTGAATCGGAATCGCAGGAACGGAGGAAGAGCGAGGGAGTGAGGTCTTGGCTTTTCGAGTTAGGATTGAGTAGGTATGCACCTATGTTTGAGATCCACGAGGTCGATGATGAGTTACTTCCGATGTTGACTTTGGAGGATCTCAAGGATATGGGAATCAACGCCGTTGGTTCCAGAAGGAAAATGTACACTGCGATCCAGAAGCTTCGAAAATGCATGCCGTGA 891 0.4871 MAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAPDAAAEIAPPDPATTSQPGAEIAAPPALAPKRQRRPSVRLGEIGDQRAATHGHDSHTRRPSMPPWSWRTPKESSRTSKARSVANLNGGEEFGNNNRRGKAKRGGPTTKRLRSNWIPRATIDENGDEEGFRDFEHEHEHEHGHDQSPVHSVEENGVDYWHVDRNEDPRVRVSDNEGVESESQERRKSEGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYTAIQKLRKCMP 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02367 296 MobiDBLite consensus disorder prediction 167 229 - -
Cca07g02367 296 ProSiteProfiles SAM domain profile. 231 294 IPR001660 GO:0005515
Cca07g02367 296 Pfam SAM domain (Sterile alpha motif) 233 292 IPR001660 GO:0005515
Cca07g02367 296 Gene3D - 230 291 IPR013761 -
Cca07g02367 296 PANTHER SCP160 49 295 - -
Cca07g02367 296 MobiDBLite consensus disorder prediction 37 229 - -
Cca07g02367 296 MobiDBLite consensus disorder prediction 82 105 - -
Cca07g02367 296 CDD SAM_superfamily 236 290 - -
Cca07g02367 296 PANTHER PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE 49 295 - -
Cca07g02367 296 SMART SAM_4 228 294 IPR001660 GO:0005515
Cca07g02367 296 MobiDBLite consensus disorder prediction 114 138 - -
Cca07g02367 296 SUPERFAMILY SAM/Pointed domain 233 294 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02367 Cca-Chr7 52291130 52292020 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02367 - - vra:106758807 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02367 07 52291130 52292020 Cca07g02367 07 52291130 52292020 ECH