Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g01638 ATGAGAAATTCACACGTTCCATTCCTTTCCATCATATTCAGCTACTGCTTCTGGATACACCACAGTGTTTACTTCACTAGGGTATCTGGCCAAATTGTTGAGGATCAACAACAATCATTGCTCAAACTAAAGAACAGCCTCAAATTCGAGCATGGAAAATCTAGTAAACTTGTGTACTGGAATTCAAGCATAGCTTGCTGTGAGTGGAGGTGGAGGGGTGTAGCCTGTGATGAGGAGGGACACGTTATTGGCCTTGATCTGAGTGGAGAATCAATCAATGGAGGATTTGACAATTCAAGTAATCTTTTCAGTCTGCAAAATCTCCAGATATTGAATTTGGCTGATAATAAATTCAGTTCTGAGATACCATCTAGATTCAACAATTTGAAGAACTTAACATATCTGAATTTATCAAATGCTGGCTTTATGGGCCAAATTCCAATAGAGATTTCTTTCCTGACAAGGTGGGTTACTCTTGATATCTCTTTACTCCTATTTATATGGGCAACCTCTGAAACTTGA 522 0.387 MRNSHVPFLSIIFSYCFWIHHSVYFTRVSGQIVEDQQQSLLKLKNSLKFEHGKSSKLVYWNSSIACCEWRWRGVACDEEGHVIGLDLSGESINGGFDNSSNLFSLQNLQILNLADNKFSSEIPSRFNNLKNLTYLNLSNAGFMGQIPIEISFLTRWVTLDISLLLFIWATSET 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g01638 173 SUPERFAMILY L domain-like 34 163 - -
Cca07g01638 173 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Cca07g01638 173 Gene3D Ribonuclease Inhibitor 33 166 IPR032675 -
Cca07g01638 173 Pfam Leucine Rich repeats (2 copies) 106 144 IPR025875 -
Cca07g01638 173 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 23 164 - -
Cca07g01638 173 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE 23 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g01638 Cca-Chr7 41639245 41639766 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g01638 33 162 Receptor kinase-like Gene Family AT3G11080 39.456 1.06e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g01638 - - ccaj:109815399 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02016 01 47061971 47063513 Cca07g01638 07 41639245 41639766 PCT