Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00866 ATGAGGCCTGGTGTAGCATTAAAGCCTGGGACCCCCGTTGGAGATGTTTATCCTCTGGTGGAAGCTGAAAATCCTGTGGAAATGGTTCTTGTGATGACTGTAGAGCCTGGGTTTGGAGGACAAAAATTTATGCCCGAGATGATGGATAAAGTACGTATACTTAGGATGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGGCCTTCAACCATAGACATGGCCGCATCAGCTGGGGCAAATTGCATTGTTGCTGGAAGTTCCGTGTTTGGAGCCCCTGAGCCAGCTCAAGTAATATCCTTACTGAGGAATTCCGTGGAGAAAGCCCAGCAAACCTTCATACAGTAA 354 0.4689 MRPGVALKPGTPVGDVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMDKVRILRMKYPSLDIEVDGGLGPSTIDMAASAGANCIVAGSSVFGAPEPAQVISLLRNSVEKAQQTFIQ 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00866 117 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 29 51 IPR000056 GO:0005975|GO:0016857
Cca07g00866 117 SUPERFAMILY Ribulose-phoshate binding barrel 2 110 IPR011060 -
Cca07g00866 117 PANTHER RIBULOSE-PHOSPHATE 3-EPIMERASE 1 114 - -
Cca07g00866 117 Pfam Ribulose-phosphate 3 epimerase family 1 92 IPR000056 GO:0005975|GO:0016857
Cca07g00866 117 Gene3D Aldolase class I 1 115 IPR013785 -
Cca07g00866 117 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 1 114 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00866 Cca-Chr7 14762747 14764140 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00866 K01783 - gmx:100500085 215.698