Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00843 ATGACCCTCCGTCTCGTGTCAGCTCCGCCGTCGTTCTCTATCTTCACATgccgcgccgccgcctccaccgccctcccttcgccggcgccgacgccTGCTTCTTCAATTCCACAGTCGCCGCCGCTAACGTGTGCTCTTCACTGCCCGCACTTCCAATCGTGTTCGGGGTGCACGCACGAGTTCAGCCTCCACCGTCCGGTTATATTGGACGACGCCACCGATTTTTTTCGGAAACACGGCGTCTCCGACTTCACATTTGACACGTGCAAACTGTGGGGTTGGAGGTGCCGTGCGAAATTGGCCGTGCGTGGCTCTTCAACGGACCCTCTAATTGGGCTCTATGAGGAGGGTACTCATAACGTAGTTGACATTCCACAATGCAAAGCTCATCATCCTAATATTAATGCTGCTGTGGAGCTGCTTAGACGAGGTATTTCTGAATTAGGTGTTGAGCCATATATTGAAGATGAAGGTACTGGCAATTTGCGATATGTCCAGATGGCTGTGACAACATACAACACATCTCTTCCTGCGGCTGAAAGATATAAGAATGGAAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAATGAAAATTCACCTGGTTCAGACAAACTGAATGCATTAGCAGATTTTCTATGGAAAAATGGTGGACCACGGAGTAGGCTACATTTAATTCACTCTGTGTGGGCCAACTTTCAGACTTCTACCAACAATATAATTTTTGGGAATAAATGGAGACATCTTCTTGGAGAAAGAGATTTTTGGGAACATGTTGGTGGAATTGACGTGTCCTTGGCACCTTCTAGTTTCGGCCAAGCAAACACACGGGCTTTTGATGCCTTGCTTCGGAAGTTACAGAAATATGTTCCACATGAATCAGCTGTTGCTGATTTGTATGCTGGAGCTGGGGTCATTGGGTTGTCATTAGCTGCCACAAGAAAATCCATTAAATGCATTGAGATTAACAAAGAGTCAAAGGCATCTTTTGAGAAGACCATAGAACGTTTGCCTGCCACCGTTGACAGCAGTATTACTTGGCATCACGCAGATGCTTCAAAAGAGCCTTTTATGTGGCTTATGGGCTCAGATGTGGTTGTCATTGATCCTCCCAGGAAAGGACTAGATGTGTCTCTCATTGATGCATTGAAGAATATATCTTCTGTTGAGCGTAAAGCCTTTTCATCTTCTGAAAGCTCAAACTCTGCCCAGGAAGAGAAAAGACCATGGGTTTTACGTGCTAAAGAAGCTTCAGTCCAAATTGGAAGCAAACCACCTTCAGCTAACATTGCTCAATCAGTGCCACAAACCCTTATTTATATAAGTTGTGGATGGGAAAGTTTTAAGGAGGACTGCAAGTCATTGTTGTCTTGTAAGGCATGGCATTTGGAGAAAGCTCATGGTTTTAATTTCTTTCCTGGTACCCAGAGCATTGAAGTTCTAGCAGTATTCAAGAGGGGCCCTCCGAAAAAGAAACCTGGAAAGAAAAAGAAAAAACACCTGCAAGGAGCTGCGAGACATTAA 1524 0.4311 MTLRLVSAPPSFSIFTCRAAASTALPSPAPTPASSIPQSPPLTCALHCPHFQSCSGCTHEFSLHRPVILDDATDFFRKHGVSDFTFDTCKLWGWRCRAKLAVRGSSTDPLIGLYEEGTHNVVDIPQCKAHHPNINAAVELLRRGISELGVEPYIEDEGTGNLRYVQMAVTTYNTSLPAAERYKNGKVQVTLVWNSRNENSPGSDKLNALADFLWKNGGPRSRLHLIHSVWANFQTSTNNIIFGNKWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLRKLQKYVPHESAVADLYAGAGVIGLSLAATRKSIKCIEINKESKASFEKTIERLPATVDSSITWHHADASKEPFMWLMGSDVVVIDPPRKGLDVSLIDALKNISSVERKAFSSSESSNSAQEEKRPWVLRAKEASVQIGSKPPSANIAQSVPQTLIYISCGWESFKEDCKSLLSCKAWHLEKAHGFNFFPGTQSIEVLAVFKRGPPKKKPGKKKKKHLQGAARH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00843 507 PANTHER BNAA06G32370D PROTEIN 27 487 - -
Cca07g00843 507 Gene3D - 95 271 - -
Cca07g00843 507 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 52 487 IPR010280 GO:0006396|GO:0008173
Cca07g00843 507 Pfam Methyltransferase small domain 280 371 IPR007848 GO:0008168
Cca07g00843 507 MobiDBLite consensus disorder prediction 485 507 - -
Cca07g00843 507 MobiDBLite consensus disorder prediction 488 507 - -
Cca07g00843 507 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 46 484 IPR029063 -
Cca07g00843 507 Gene3D Vaccinia Virus protein VP39 272 420 IPR029063 -
Cca07g00843 507 CDD AdoMet_MTases 296 389 - -
Cca07g00843 507 Gene3D Vaccinia Virus protein VP39 421 484 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00843 - - gmx:100816889 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00843 07 14263124 14269237 Cca07g00843 07 14263124 14269237 ECH