Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00838 ATGAGAGTTCTGGAGTTATCACCCTCTGATGGCAATGGTTCCTCTGATAATGGAGATGAACCTTTACCTCAGGATGCAGATTATAGCAATGTTCTGAGTCTCAGCGATGAGCTAGAGACTTCAATCTTGGCAAGATTTCCAAGATCACAGCACTGGAAACTATGCTTTCTCAACAAGCGGTTCTTAACTCTAGCAAGGAGTGGTGAGATCTACAAAATCAGGAGAGAGTTAGGATTCAAAGAGCCTTCGGTTTTCATGTTAGCAAGTGGGGATTGCAATTGGTGGGGAATGGAGTGGCCTTTTAAATCAAGCAAGAAGCTCCCTCCTATTCAATCAGATTATAGTTTTGAGTTTGGAGATAAGGAGTCATTTTGTGCAGGTTCCCACTTATTAGTCTCAGGCAAGGAGATTGATGGAACTGTTATTTGGAGGTTTGATTCAATAAGAAACGAATGGCTCAAAGGGCCATCTATGATCAACCCTAGGTGTCTTTTTGCATCAGCCACAAGTGGTGCCTTGGCTTTTGTTGCTGGGGGTCTTGATGCAAGAGCTTACTCCTTCCAAATCTTGGATTCTGCTGAGAAGTACAATTCTGAAAGCCAGTGCTGGGAACCCCTCCCAAGGATGAACAAAAGGAGAAAGTTTTGTTCAGGCTGTTTCATGGATAACAAGTTCTATGTCCTTGGAGGACAAGATGAACATGGGAAGGACCTCACTTGTGGGGAATTCTTTGATGGGAAAACAAACAATTGGACCTTGATTCCTGATATGTGGAAAGATATTCCACTTTTTGTTTCACAATCTCCACCTCTTCTTGCTGTTGTGAACAATGAGTTGTACACACTGGATTCTTCTTCCAATGAGCTGAAAATGTATGAGAAGGGAAGCAACTCATGGAAGACTTTAGGAGTGGTTCCTGTGAGGGCTGATGCACAAGGAGGTTGGGGTGTGGCATTTAAGTCTCTTGGTGATGAGTTACTTGTTATTGGTGCACCTTCTGTATCCCACTCCGAGCGTGCCTTGTCTATGTACACATGTTGCCCTGATCCTGATGATGAGAAATTGAGGTGGAGGCAAATTGGATGTGGCAACATTCAGCTCAATCACTTTATCCGAAATTGTGCTGTGATGGGAACCTAA 1140 0.4351 MRVLELSPSDGNGSSDNGDEPLPQDADYSNVLSLSDELETSILARFPRSQHWKLCFLNKRFLTLARSGEIYKIRRELGFKEPSVFMLASGDCNWWGMEWPFKSSKKLPPIQSDYSFEFGDKESFCAGSHLLVSGKEIDGTVIWRFDSIRNEWLKGPSMINPRCLFASATSGALAFVAGGLDARAYSFQILDSAEKYNSESQCWEPLPRMNKRRKFCSGCFMDNKFYVLGGQDEHGKDLTCGEFFDGKTNNWTLIPDMWKDIPLFVSQSPPLLAVVNNELYTLDSSSNELKMYEKGSNSWKTLGVVPVRADAQGGWGVAFKSLGDELLVIGAPSVSHSERALSMYTCCPDPDDEKLRWRQIGCGNIQLNHFIRNCAVMGT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00838 379 Pfam Kelch motif 212 257 IPR006652 GO:0005515
Cca07g00838 379 Pfam Kelch motif 161 210 IPR006652 GO:0005515
Cca07g00838 379 Gene3D - 88 361 IPR015915 GO:0005515
Cca07g00838 379 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 7 378 - -
Cca07g00838 379 SUPERFAMILY Kelch motif 124 354 IPR015915 GO:0005515
Cca07g00838 379 MobiDBLite consensus disorder prediction 1 23 - -
Cca07g00838 379 SMART kelc_smart 129 172 IPR006652 GO:0005515
Cca07g00838 379 SMART kelc_smart 173 223 IPR006652 GO:0005515
Cca07g00838 379 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 7 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00838 Cca-Chr7 14153581 14154720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00838 16 254 Miscellaneous Gene Families AT4G33900 26.939 6.50e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00838 - - gmx:100777338 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00838 07 14153581 14154720 Cca07g00838 07 14153581 14154720 ECH