Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00831 ATGCAAACGGTTCGTGTTTGTGGGGATAATCAGCTATGGCGTTACGACGCCGTCTCGTTCTTCGGCTCTCGCGTGTCGTTTCGGAGCACCCGTGTGTCGTTTGGCGCTCCCAGAAGAAGCCGAGTGGTGTCCAAGGTTGTTAAGCGCAGCCCCAAGCGTCTCAAGTACACTTCCGGTTCTCGCTTCACCAAGGAGGATGGTTTGGTGTACGTTGAAGCAGACCCGTCTGCGTCTGACTCTTGGAAATTGGAACCGATTGTTAGTATGTTGAAACAAGGTGCTGTTGGTGTCATCCCCACTGATACCCTGTATGCAATTGTATGTGACCTCAGAAGCCACTCAGCCATTGAACGTCTTCGTAGAATCAAGAATATAGAAGCTTCAAAGCCTCTTAGCATCTTGTGCTACTCATTTCGGGACATAGACAAGTACACAGTTGGATTTCCACGTGGTGATGGTCAAGGCCATGCTAATCTATTCAAAGCTGTTAAGCATTGCTTACCTGGTCCTTACACATTCATCCTAATTGCAAGCAAAGAATTACCCAAGCAATGCATTAGGTTTGGGACTTCTTCTGCCAAATATGCATCAAGAAAAAATGTGGGTGTCCGCATGCCTGATGATGCCATTTGCCAATCAATACTAAAGGAGATGGATGCACCATTAATATGTACAAGCATCAAGTTCCAGAAGGAAGATGAATGGATGATCGATCCAGTTATGATAGCTGATACATATGGACCAGAGGGTCTTGATTTTGTTGTTGATGGTGGTGTAAGAGTGGCTGAACCGTCCACAGTGGTCGACATGACAAAACTGCCTCCCAAAGTACTACGACAAGGAAAGGGTCCTATTTTACATTGGATGGAACTGGAAGATGATCAGATGATTGATGTTGATAAGGATCTAATCCCTGCTGGTATTTGA 927 0.4574 MQTVRVCGDNQLWRYDAVSFFGSRVSFRSTRVSFGAPRRSRVVSKVVKRSPKRLKYTSGSRFTKEDGLVYVEADPSASDSWKLEPIVSMLKQGAVGVIPTDTLYAIVCDLRSHSAIERLRRIKNIEASKPLSILCYSFRDIDKYTVGFPRGDGQGHANLFKAVKHCLPGPYTFILIASKELPKQCIRFGTSSAKYASRKNVGVRMPDDAICQSILKEMDAPLICTSIKFQKEDEWMIDPVMIADTYGPEGLDFVVDGGVRVAEPSTVVDMTKLPPKVLRQGKGPILHWMELEDDQMIDVDKDLIPAGI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00831 308 ProSiteProfiles YrdC-like domain profile. 80 283 IPR006070 GO:0003725
Cca07g00831 308 Gene3D DHBP synthase 69 289 - -
Cca07g00831 308 PANTHER DHBP SYNTHASE RIBB-LIKE ALPHA/BETA DOMAIN-CONTAINING PROTEIN 23 298 - -
Cca07g00831 308 SUPERFAMILY YrdC/RibB 73 284 IPR017945 -
Cca07g00831 308 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 79 283 IPR006070 GO:0003725
Cca07g00831 308 Pfam Telomere recombination 89 281 IPR006070 GO:0003725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00831 - - gmx:100789682 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00831 07 14017381 14030748 Cca07g00831 07 14017381 14030748 ECH