Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00791 ATGCACTTCGAAGCAGCGGCGTCGTGGGGTGGGTACGTGGCGGGGCCGCCTCGGGGCACGGTGGTGGGTGACCCGGTGGAGCGCATAGAGAGGCTGGCGTCGGAGAACGCGGTGGTGATATTCAGCGTGAGCACGTGCTGCATGTGCCACGCCATCAAGAGGCTGTTCTGCGGCATGGGCGTGAACCCGACCGTGCACGAGTTGGACGAGGATCCCAGAGGCAAGGACCTCGAACGCGCCCTCATGCGCCTCCTAGGTTCCGCCTCTGTTGTCCCTGTCGTCTTCATCGGAGGCAAGCTTGTCGGAACCATGGACCGAGTCATGGCCTGCCACATCAACGGCACGCTCGTTCCTCTCCTCAAAGAAGCCGGTGCCCTCTGGCTCTAG 387 0.6382 MHFEAAASWGGYVAGPPRGTVVGDPVERIERLASENAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDLERALMRLLGSASVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00791 128 SUPERFAMILY Thioredoxin-like 26 127 IPR036249 -
Cca07g00791 128 TIGRFAM GlrX-like_plant: glutaredoxin-like family 29 128 IPR011905 -
Cca07g00791 128 Gene3D Glutaredoxin 23 127 - -
Cca07g00791 128 CDD GRX_GRXh_1_2_like 37 119 - -
Cca07g00791 128 Pfam Glutaredoxin 38 101 IPR002109 -
Cca07g00791 128 PANTHER GLUTAREDOXIN 5 127 IPR011905 -
Cca07g00791 128 PANTHER GLUTAREDOXIN-C5 5 127 - -
Cca07g00791 128 ProSiteProfiles Glutaredoxin domain profile. 26 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00791 Cca-Chr7 12734078 12735141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00791 8 128 Miscellaneous Gene Families AT3G02000 63.846 7.54e-48 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00791 K03676 - gmx:100808865 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00791 07 12734078 12735141 Cca07g00791 07 12734078 12735141 ECH