Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00779 ATGAAGTCCTCGCTCAGCATGTTGCGCAAAATCGCACTCCCCAAGAGCGTCTCCAAGGACAAGAAGGACTTCCACCCCGCCGTTAAGTTCCACGAACTCGCTCTCGCTGCCAAGGACATGCAAGATATGAGAGATTGCTATGATAGCTTGCTTTCTGCAGCTGCTGCTACACAAAACAGTGCTTATGAATTTGCTGAGTCGCTACAGGAAATGGGTACTTGTCTACTGGAGAAAACTGCCTTAAATGATGACGAAGAAAGTGGTAAAGTTTTGGGGATGCTTGGAAATGTGCAGCTTGAACTTCAGAAGCTTGTTGATAGCTATCGATCACACATAGTACTGACAATAACCAATCCATCAGAGTCTCTTCTTAATGAACTAAGAACTGTTGAGGACATGAAGCGGCAATGTGATGAAAAAAGGGACGTTTATGAATATATGATTGCCCAACAGAAAGAGAAAGGAAAGTCAAAAAGTAGTAAAGGTGAAAGTATCACCTCACAGCAGTTGCAAGCAGCTCAAGATGAATATGAAGAGGAAGCAACACACTGTGCCTTTCGGTTAAAATCGCTGAAGCAAGGCCAGTCACGTAGTCTTCTAACACAAGCAGCACGTCACCATGCCGCTCAGCTGAATTTCTTTCGGAAAGGACTTAAATCACTAGAAGCTGTTGAGCCGCATGTTAGGATGGTTGCCGAACGGCAACATATTGATTACCAATTCAGTGGCCTTGAGGATGATGCTGGTGAAAATAGTAATGATGAGGACGGGAATGATTTTGATGCCATTGAAGGTGGTGAGTTGAGTTTTGACTACAGATCAAATAAGCAAGGGCCATATATTGTTTCCACATCACCAAACTCAGCAGAGGTGGAAGAATCAGGTCATTCATATGTTCGAGCTTCAACTGCAGAAACTGCAGAGACAAGTTTAGACAAGAACCAAGGAGATTTTAAAGTTTCAAATAGAGATCATAGAGTTGGCAGTTATTCAGCTCCAATACTTGCAGAAAAGAAATTTGACCCAGCTGAAAAAGTTAGACAACTTATATCAGCATCTGCAGCAAAGTCTAATGCATATGTACTTCCTACACCTGTTAACATCAAAGAAACCAAAACTAGCACAGCCCCCCGCACCAGTGCAAGTGGATCTTTGCATAATTTGTGGCATTCTTCACCATTGGATGAAAAAAAGAGTGAGAAAGATGTTGATAATAAATTGTCAGAACCGACTATCCCTAGAGCTCACTCTGTTCTCAAAGAAAGTAACACTGATACTACATCCACCCAGTTGCCACGCCCTTCAGCAGAGGGACTCTCACCTCCGCAAGTTGATCTTTTCAATGCATCTGATAATAAGAAAATAAAAAGACAAGCTTATTCGGGTCCATTGACTAATAAACCATTATCAGTAAAACCTGTTTCTGGGGGTTTTGCACGTTTACCAGTGCCCCAGCCTTCATCTCCAAAAGCATCTCCTAATGCTTCACCTCCCCTTGTCTCTTCACCCAGGATAAGTGAGCTTCATGAACTTCCTAGACCTCCTGGTAGTCAATCTAGCAAGGTGGTGAAATCTCGAGTGGGTCATTCTGCTCCATTAGTATTAAAAAATCCACAGGTTGCTGTGACGAATAAATTTCCTTCAGTTGTATCCAGTGCAGCATCTCCACTTCCAACTCCACCTATAATTGTCTCTAGGAGTTTTTCTATACCCTCCAGTGGTCAGAGAGGTATTTCATTAAATGTTTCTAATACTAAGTATTTGGATACGCCCCAAGTTTCAAAGGTTGATAAAGCTGCATCACCTCCACTAACACCCATGTCCCAGAGAGCATCTAATATATCTGACCTGGCTTCTCACTCTAGTGAAATCCAAGTGGATGCAGGTGGGAGCTAA 1896 0.4267 MKSSLSMLRKIALPKSVSKDKKDFHPAVKFHELALAAKDMQDMRDCYDSLLSAAAATQNSAYEFAESLQEMGTCLLEKTALNDDEESGKVLGMLGNVQLELQKLVDSYRSHIVLTITNPSESLLNELRTVEDMKRQCDEKRDVYEYMIAQQKEKGKSKSSKGESITSQQLQAAQDEYEEEATHCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVRMVAERQHIDYQFSGLEDDAGENSNDEDGNDFDAIEGGELSFDYRSNKQGPYIVSTSPNSAEVEESGHSYVRASTAETAETSLDKNQGDFKVSNRDHRVGSYSAPILAEKKFDPAEKVRQLISASAAKSNAYVLPTPVNIKETKTSTAPRTSASGSLHNLWHSSPLDEKKSEKDVDNKLSEPTIPRAHSVLKESNTDTTSTQLPRPSAEGLSPPQVDLFNASDNKKIKRQAYSGPLTNKPLSVKPVSGGFARLPVPQPSSPKASPNASPPLVSSPRISELHELPRPPGSQSSKVVKSRVGHSAPLVLKNPQVAVTNKFPSVVSSAASPLPTPPIIVSRSFSIPSSGQRGISLNVSNTKYLDTPQVSKVDKAASPPLTPMSQRASNISDLASHSSEIQVDAGGS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00779 631 MobiDBLite consensus disorder prediction 244 264 - -
Cca07g00779 631 MobiDBLite consensus disorder prediction 303 322 - -
Cca07g00779 631 CDD BAR 39 227 - -
Cca07g00779 631 Gene3D Arfaptin homology (AH) domain/BAR domain 28 244 IPR027267 -
Cca07g00779 631 MobiDBLite consensus disorder prediction 371 447 - -
Cca07g00779 631 MobiDBLite consensus disorder prediction 391 409 - -
Cca07g00779 631 MobiDBLite consensus disorder prediction 371 389 - -
Cca07g00779 631 MobiDBLite consensus disorder prediction 155 174 - -
Cca07g00779 631 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 616 IPR037488 -
Cca07g00779 631 MobiDBLite consensus disorder prediction 605 631 - -
Cca07g00779 631 MobiDBLite consensus disorder prediction 417 436 - -
Cca07g00779 631 MobiDBLite consensus disorder prediction 248 262 - -
Cca07g00779 631 MobiDBLite consensus disorder prediction 459 502 - -
Cca07g00779 631 SUPERFAMILY BAR/IMD domain-like 32 229 IPR027267 -
Cca07g00779 631 MobiDBLite consensus disorder prediction 595 631 - -
Cca07g00779 631 Pfam BAR domain 52 227 IPR004148 GO:0005515|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00779 Cca-Chr7 12306314 12316196 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00779 - - gmx:100775799 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00779 07 12306314 12316196 Cca07g00779 07 12306314 12316196 ECH