Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00773 ATGGATGAACCCAAACATTCCTCACTCTCACAACAACCTTCGACATTCTTCATGGCTCAGGACATCCTCAGAATCCTCGCTGCTCTTCTCTCCGCAGCTTCTATCGCCGTCATGGTCACCAACACCCAAACCGTCTTCATCTTCACTCTTCGCTTCGAGGCACACTTTTATTACCAACCCACTCTCAAGTTTTTTGTTGCCGCAAACGGTGTTGTCGCTGCTCTGTCTTTGTTGACGCTCATATTGAACCTTCTCCTCAAACGTCAGCCTTCACGAGGATACCATTTCTTTCTATTCCTCCATGACTTAGCGATGACGGTGCTGTTGATAGCTGGATGTGCAGCAGCAACTGCAATAGGGTACGTGGGACAGTTTGGAGAGGAGCATGTGGGTTGGCAACCAATATGTGACCATGTGCACAAGTTCTGCAGAACAAACTTGGTTTCTCTTTTGCTTTCTTATTTTTCCTTCTTTGCCTATTTTGCACTCACTCTCTTATCACCCTTCAAATGCCCCTTTTCTTCTTCTCCCAAGAATTAA 540 0.4611 MDEPKHSSLSQQPSTFFMAQDILRILAALLSAASIAVMVTNTQTVFIFTLRFEAHFYYQPTLKFFVAANGVVAALSLLTLILNLLLKRQPSRGYHFFLFLHDLAMTVLLIAGCAAATAIGYVGQFGEEHVGWQPICDHVHKFCRTNLVSLLLSYFSFFAYFALTLLSPFKCPFSSSPKN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00773 179 PANTHER CASP-LIKE PROTEIN 1F1 9 168 - -
Cca07g00773 179 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 9 168 - -
Cca07g00773 179 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 22 169 IPR006459 -
Cca07g00773 179 Pfam Casparian strip membrane protein domain 19 159 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00773 Cca-Chr7 12109852 12111817 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00773 - - gmx:102659722 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00773 07 12109852 12111817 Cca07g00773 07 12109852 12111817 ECH