Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00755 ATGCTCAAAGAGGAAAAAATAAGTGAGCCAAAATACATCATCCATTCAATTAGTGGTAGAAGTGGAGATTATGGTGATTGGAGAAGAATGGCCACGTCCTCCACCACCAATAAAGAGGACAATGGTAGAGCATATGGTGGGCCACAGTTAGAAACAAAACTAATCCTAGATGCCTCAGCTGGAGCACATGAGACAAAAACGTTTGCTACTCCTTCCATAAATACACTCATCAACCTTCATTTCTTTCTGTGCTTTCAATTCAACCTGAGATCCGCCAAACTCCACACACCACACCTCTTGTTCTTTTCCTCAGATCTTCAAGCCGCTATGCTTAGAACACTAGCCAGGGACTTCAAGCTCACCACCCTTGCCAATGATTTGCTTCAAAAACGCAGCAGATTCTATGCAACTTTGGTTGGTGGAAGAAGCAGGCTCGAGGGAAAAGTGGCACTCATAACAGGATCCGCAAGTGGACTCGGCAAGGCCACGGCCCATGAGTTTGTCCAACATGGGGCCCAAGTAATCATTGCTGACAACGACACCCAACTTGGCCCACAGACTGCAAAAGAGCTGGGCCCATCAGCCCGCTACGTGGAATGCGACGTCACTGTGGAGGCCCAAGTGGCAGAGGCCGTGAATGTGGCCGTGGCCCACTACGGCAAGCTGGACATCATGTACAACAATGCTGGCATCGCAGGCCCAACGTTTCCACCCAGCATAGCAGATCTGGACCTTGATGAGTTTGATAGGGTCATGAGGATCAACATTAGGGGAATGATTGCAGGCATAAAGCATGCGGCCCGGGTCATGATACCAGTGGGCTCTGGGTCCATTCTATGCACATCAAGCATAAGTGGGCTCATGGGTGGGCTTGGGCCTCATCCTTATACAATATCAAAGTCCACTATTCCTGGGATAGTGAAATCTGTGGCTAGTGAGCTTTGCAAAGCTGGGATAAGGATAAACTGCATATCCCCAGCTCCAATTGCTACACCTATGGTTTTGGCCCAATTAGGAAAATTTTACCCTGGCTTAACCCAAGAACAAATTGTGGGTATTGTGAATGGGGTTGGAGAGCTCAAAGGTGCTACGTGTGAGGACATTGATGTGGCTAGGGCTGCATTGTTCTTGGCATCAGATGAAGCAAAGTTTATCTCAGGCCACAACCTCATTGTGGATGGAGGCTTCACCACCTTTAAAAGTCTTAGTTTCCCTTCTCCAAATGTTAACTCAGTTTAA 1239 0.4778 MLKEEKISEPKYIIHSISGRSGDYGDWRRMATSSTTNKEDNGRAYGGPQLETKLILDASAGAHETKTFATPSINTLINLHFFLCFQFNLRSAKLHTPHLLFFSSDLQAAMLRTLARDFKLTTLANDLLQKRSRFYATLVGGRSRLEGKVALITGSASGLGKATAHEFVQHGAQVIIADNDTQLGPQTAKELGPSARYVECDVTVEAQVAEAVNVAVAHYGKLDIMYNNAGIAGPTFPPSIADLDLDEFDRVMRINIRGMIAGIKHAARVMIPVGSGSILCTSSISGLMGGLGPHPYTISKSTIPGIVKSVASELCKAGIRINCISPAPIATPMVLAQLGKFYPGLTQEQIVGIVNGVGELKGATCEDIDVARAALFLASDEAKFISGHNLIVDGGFTTFKSLSFPSPNVNSV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00755 412 Gene3D - 140 404 - -
Cca07g00755 412 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 146 398 IPR036291 -
Cca07g00755 412 PRINTS Glucose/ribitol dehydrogenase family signature 220 231 IPR002347 -
Cca07g00755 412 PRINTS Glucose/ribitol dehydrogenase family signature 317 334 IPR002347 -
Cca07g00755 412 PRINTS Glucose/ribitol dehydrogenase family signature 149 166 IPR002347 -
Cca07g00755 412 PRINTS Glucose/ribitol dehydrogenase family signature 296 315 IPR002347 -
Cca07g00755 412 PRINTS Glucose/ribitol dehydrogenase family signature 270 286 IPR002347 -
Cca07g00755 412 PRINTS Glucose/ribitol dehydrogenase family signature 360 380 IPR002347 -
Cca07g00755 412 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 276 284 IPR002347 -
Cca07g00755 412 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 220 231 IPR002347 -
Cca07g00755 412 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 296 315 IPR002347 -
Cca07g00755 412 Pfam Enoyl-(Acyl carrier protein) reductase 154 397 - -
Cca07g00755 412 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 116 408 - -
Cca07g00755 412 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 116 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00755 Cca-Chr7 11739149 11748256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00755 145 403 Acyl Lipid Metabolism Gene Families AT1G63380 29.927 9.84e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00755 - - gmx:100808525 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00755 07 11739149 11748256 Cca07g00755 07 11739149 11748256 ECH