Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00752 ATGCAGACAGCCCTAACCTTGGCAGCCCCCAACGTTGTGCCTTTGGCACCCACAAAGAGTGTCTCCCATCTCACCACCTTCCCCACCAAGTTGAAAGTCCCACATCGCCTCTCTCCAATGAAGGTTGCGACCGTGGAGTATGACACTTCCACAGTGGACTACAACACTGCGTTCTCGGTGTTTCCGGCAGAAGCATGCGAAACTGTAGGAGGGGAAGCGTGCTTGGCAGAGATGTACCCCGAAGCCAGGCTGCAGCCTCAGGCCAAGAACGAGGCACCACGAGCTGCTACAGAGAACGTTGAGAGAGAGTATCTTGAATACAACGATCCCAAAACGGTATTTCGTGCAGAGGCTTGTGACGATCTTGGAGGAATTTTCTGTGAGCACGAGTATCAGAAGAGTGTGTACTAG 411 0.5304 MQTALTLAAPNVVPLAPTKSVSHLTTFPTKLKVPHRLSPMKVATVEYDTSTVDYNTAFSVFPAEACETVGGEACLAEMYPEARLQPQAKNEAPRAATENVEREYLEYNDPKTVFRAEACDDLGGIFCEHEYQKSVY 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00752 136 Pfam Light regulated protein Lir1 1 128 IPR009856 GO:0009507
Cca07g00752 136 PANTHER LIGHT-REGULATED PROTEIN 1 136 - -
Cca07g00752 136 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 136 IPR009856 GO:0009507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00752 - - gmx:100305960 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00752 07 11703973 11705129 Cca07g00752 07 11703973 11705129 ECH