Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00744 ATGGTCAATACGGCGGTGGTCTTCGCCGTTTTGGTGGCGGCGATTTGGGGTGCGGAATCAGAGTACATAGAGTACAACACGACGCAGAGGATAGTCTCAGGCAAAATAAACGTCCACTTGGTACCTCATTCTCACGACGATGTTGGCTGGCTCAAGACCGTTGATCAGTACTACGTTGGAGCCAACAACTCCATTCGGGGTGCATGTGTGCAGAACGTGCTGGATTCTATGATATCCGCGCTCTTGGAGGACAAGAATCGCAAGTTTATCTATGTTGAGATGGCATTTTTTCAGAGATGGTGGAGACagcaaagtaaagcaatgaaaattaaagtcaagGAGCTTGTCAACTCGGGTCAATTGGAATTCATAAATGGGGGTATGTGTATGCATGATGAAGCTACCCCGCATTACATTGATCTAATTGACCAGACCACTCTCGGACATCAATTTATCCTAGAGGAATTTGGTAAAGTGCCAAGAGTTGGTTGGCAGATTGACCCATTTGGCCATTCTGCAGTTCAGGCTTATTTGCTTGGTGCTGAGCTAGGATTCGATTCACTCTTTTTTGCTAGAATTGATTACCAAGACAGAGCCAAGCGATTAAAGGAGAAGACTCTAGAGTTTATTTGGCGGGGTTCCAGATCTCTTGGTTCTTCTTCACAAATATTTACTGGGATATTTCCTAGGCATTATGATCCTCCTGATGGTTTCACGTTTGAGATAAATGATGTTTCCCCTCCTATTCAAGATGACATTCTACTTTTTGACTATAATGTTCAAGAAAGGGTCAACGACTTTGTATCTGCAGCCTTAGCTCAGGCTAATGTGACCAAAACAAATCACATTATGTGGACAATGGGGACAGATTTCCGTTATCAATATGCCAATTCATGGTTCAGGCAGATGGATAAGTTTATTCACTACGTCAACCAGGATGGACGTGTCAATGCATTATATTCAACACCATCTATCTACACTGATGCAAAATATGCAGCTAATGAGTATTGGCCTCTTAAAGTTGATGATTTCTTCCCGTATGCAGATCACCCAAATGCATATTGGACTGGATATTTTACAAGCAGGCCAGCCTTGAAGGGCTACGTGAGAGTGATGAGTGCTTACTATCAGGCTGCAAGGCAATTGGAATATTTTAAAGGGAGGAATGAAACAGGACCAAATACCGATGCATTAGCTGATGCTTTAGCAATTGCTCAGCACCATGATGCAGTTAGTGGCACAGAAAGGCAGCATGTTGCTTCTGATTATGCACTGCGACTCTCAATGGGATATGCAGAGGCTGAAAGGTTGGTTTCATCTGCACTTGCTTCGTTGGTAAACCAAAGATCAAGTTCGCATAGGGTGAACCCGTGTCCTCTGCTTAATATAAGTTACTGTCCTCCATCTGAGGCTACGTTGGTTAATGGAAAAAGCTTGGTGATTGTTGTTTATAATCCTCTTGCTTGGAATAGGGAAGATGTGATTCGAATTCCTGTTTCTACTGGACAGGTTTTTGTCCAGGATTTTGCTGGGAAGAAAATTGAGTCTCAGCTTCTTCCACTGTCAAATGCTACTTTGACAATGAGAAAACATTATGTCAGAGCATATATAGGAAAATCTCCTGGAGGTGACGAACTCAAGTATTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGCACCTATATAGTGTCAAGCTCCAAACAGTCATGTCATAGTTCTACTATATCAAAGATGTACAGATCAGAAGGAAGTGCTAATAATAATAAAAGCATAGAAGTTGGACAGGGGAATCTAACGCTACTCTATACAGCAGATGAAGGAAAACTAGCTCAGTATGTTAACAGTAGAACTCTGGTTAAGACATCAGTTGAACAATCATACAATTATTATTCTGGAAATGATGGGACCGATAAAGATCCTCAGGCTTCTGGGGCATATGTCTTCCGTCCAAATGGCTCATTTCCCATTAAATCAAATCACCAGGAATCTTTGACTGTCCTGCGTGGTCCTATATTGGATGAAGTACATCAACAGCTTAATCCATGGGTATCCCAGATTACGAGGATATTCAAGGCAAAAGAGCATGCTGAAATTGAGTTCACAGTTGGGCCTATACCTGTGGATGATGGCATTGGGAAAGAAATTATTACTCAATTTAAAACTACAATGAAGACCAACAAGACATTCTACACAGATTCTAATGGACGTGACTTCATTAAAAGGATTCGAGATTTCCGGACAGACTGGGATCTACAAGTGAACCAACCCATAGCTGGAAACTATTACCCGGTTAATTTAGGAATATATGTGCAAGATAGTAGTATGGAATTCTCAGTGTTGGTGGACCGTTCAGTTGGAGGTTCTAGCTTGGAAGATGGCCAAATGGAGCTGATGCTCCACAGGAGGTTGCTTCATGATGATGCGAGAGGTGTAGGTGAGGTACTCAATGAAACAGCTTGCATTGCTAATAAGTGCGAGGGCGTAACGATTCAAGGAAAACTCTACCTTAGAATTGACCCAATAGGTGAAGGTGCTAAATGGCGTCGTACAGTTGGCCAGGAGTTATATTCACCATTGCTGTTGGCCTTCACAGAACAGGATGGGGATAATTGGTTGCATTTCAGTCCATCAACATTTTCCGGCATAGATTCTTCCTACAGTTTACCCAACAACACTGCTCTTTTAACCCTCCAGGAATTTAAAAATGGAAAAGTACTCCTAAGACTGGCTCACCTTTACGAGGTTGTAATTTTTACGGATGTACTGATAATAATCTTGGATTCTCTCTTACAGATTTAA 2808 0.417 MVNTAVVFAVLVAAIWGAESEYIEYNTTQRIVSGKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSMISALLEDKNRKFIYVEMAFFQRWWRQQSKAMKIKVKELVNSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFILEEFGKVPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEFIWRGSRSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDILLFDYNVQERVNDFVSAALAQANVTKTNHIMWTMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYAANEYWPLKVDDFFPYADHPNAYWTGYFTSRPALKGYVRVMSAYYQAARQLEYFKGRNETGPNTDALADALAIAQHHDAVSGTERQHVASDYALRLSMGYAEAERLVSSALASLVNQRSSSHRVNPCPLLNISYCPPSEATLVNGKSLVIVVYNPLAWNREDVIRIPVSTGQVFVQDFAGKKIESQLLPLSNATLTMRKHYVRAYIGKSPGGDELKYWLAFPVSVPPLGFSTYIVSSSKQSCHSSTISKMYRSEGSANNNKSIEVGQGNLTLLYTADEGKLAQYVNSRTLVKTSVEQSYNYYSGNDGTDKDPQASGAYVFRPNGSFPIKSNHQESLTVLRGPILDEVHQQLNPWVSQITRIFKAKEHAEIEFTVGPIPVDDGIGKEIITQFKTTMKTNKTFYTDSNGRDFIKRIRDFRTDWDLQVNQPIAGNYYPVNLGIYVQDSSMEFSVLVDRSVGGSSLEDGQMELMLHRRLLHDDARGVGEVLNETACIANKCEGVTIQGKLYLRIDPIGEGAKWRRTVGQELYSPLLLAFTEQDGDNWLHFSPSTFSGIDSSYSLPNNTALLTLQEFKNGKVLLRLAHLYEVVIFTDVLIIILDSLLQI 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00744 935 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 348 IPR000602 GO:0004559|GO:0006013
Cca07g00744 935 Gene3D - 467 595 IPR013780 -
Cca07g00744 935 Pfam Glycosyl hydrolases family 38 C-terminal domain 598 812 IPR011682 GO:0004559|GO:0006013
Cca07g00744 935 Gene3D Glycoside hydrolase family 38, central domain 396 451 IPR037094 GO:0004559|GO:0006013
Cca07g00744 935 Pfam Alpha mannosidase middle domain 353 445 IPR015341 GO:0004559|GO:0006013
Cca07g00744 935 Gene3D Glycoside hydrolase 38, N terminal domain 36 316 IPR027291 -
Cca07g00744 935 PANTHER ALPHA-MANNOSIDASE 9 919 - -
Cca07g00744 935 Gene3D Glycoside hydrolase family 38, central domain 317 395 IPR037094 GO:0004559|GO:0006013
Cca07g00744 935 Gene3D - 880 920 - -
Cca07g00744 935 SUPERFAMILY Galactose mutarotase-like 451 918 IPR011013 GO:0003824|GO:0005975|GO:0030246
Cca07g00744 935 SMART Alpha_mann_mid_2 353 427 IPR015341 GO:0004559|GO:0006013
Cca07g00744 935 Gene3D - 596 860 - -
Cca07g00744 935 CDD GH38N_AMII_LAM_like 36 312 - -
Cca07g00744 935 SUPERFAMILY Families 57/38 glycoside transferase middle domain 353 453 IPR028995 -
Cca07g00744 935 PANTHER ALPHA-MANNOSIDASE 9 919 - -
Cca07g00744 935 SUPERFAMILY Glycoside hydrolase/deacetylase 25 351 IPR011330 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00744 Cca-Chr7 11538130 11561485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00744 7 918 Glycoside Hydrolase AT3G26720 72.579 0.0 1414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00744 K01191 - gmx:100795651 1727.99