Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00743 ATGGAAGACAGTTTCAGAGTGCGAGTAGAAAAAGCCTTCGGTTCTCTTCCAATACCCtcttcttcttcttcttctcttTGGTCTCTCACAGAAGACGAAATccaaaacaaaccctcgaatcgcacacaccaacccaaaccccaacccTACGCCTCTTCAAGTGTCCCGGTTCAGCTCCAGAAGGACCTCGACGATCTCAACGACGACGATGACGCGCCACGTGGACCCTCCAAACCCCCCGATTACGACGATGACCAGTGGCAGATTAGGTCTGGTATTGGCCGAGATTGCACCCTCGATTTCGAGGAAGAGGAGGATCAGTATGACAAGCAGGCTGTTGGCAAAGAGAACGAGGGTGATCGTGTTTATATGAGGGATATAAATGATGATGGAGTTGAGATAAGTTCTTCCAATGTTTTCCCCACTTCGTTCAGGGATTTTGTGAGAGACCCACGTGCGAATCATTTGGCTGCGAGGATTAGGTTGAAGCAGGATGATGAAGCAGCTAGAAAAATTGATGCTCTGCATGTCTCTGAGAAATCTGCCCCAGACATtggtggtgatggtggtaatagtggtggtgatgCTACTAATCCCAAGTCAATTTTGAAGAGTAAGGATAATAATCCTTCTGAGCCCAGGCCGCAGAAACGTGTTCGGTTTGATTCTCAatgtgatgatagaggtaataatgatgatgacgacgatgatgatgaCAACGAGCATGAAAGAAACAGGGATGTTCGCATGAAAACCTCATCAATGGAAGATGCTTCTGCTTCGGATCAATTGGTGAGGTCACAAGAATTTGATTCAGCAGTTCCAGATTACATTCGAAATCCTTCCCGATACACGTGTTACACTTTTGATGATTCGTCAAGTGACATGGATGACAAATCGAATAGGGAAGCATACACGAGCTTCCTTGCACAGTTAAAGGGTTCCAATGCTGCCAAGGGAACAGGATCTCAATCAGATGAAGCTTTGGACGATCTGCCATCGGTAACCTTTATATCAAAGAAGAAATCTGGTGATGCTACTATGAGAGACAGTGAGATGGTGTCAAAGCAAAAGCCTGATGCTGGCAAGGAGGCCACGAATAGAAAAGCCTTCACTGTTGGCATAGCTGCTGGTGATTCTGAAAACAGTGATGTTTGTGCAATGGAGGAAGATGAACCAGAAGTGGAGGATGCTAAAAAGAGCTCACAGAAGCTGAACCCCAGTACAGGAAGAAAATTCAGGAGGAGTTGGAGGAGCCTATCGTGTAATGGCATAGTTAGTTCCTAG 1287 0.4095 MEDSFRVRVEKAFGSLPIPSSSSSSLWSLTEDEIQNKPSNRTHQPKPQPYASSSVPVQLQKDLDDLNDDDDAPRGPSKPPDYDDDQWQIRSGIGRDCTLDFEEEEDQYDKQAVGKENEGDRVYMRDINDDGVEISSSNVFPTSFRDFVRDPRANHLAARIRLKQDDEAARKIDALHVSEKSAPDIGGDGGNSGGDATNPKSILKSKDNNPSEPRPQKRVRFDSQCDDRGNNDDDDDDDDNEHERNRDVRMKTSSMEDASASDQLVRSQEFDSAVPDYIRNPSRYTCYTFDDSSSDMDDKSNREAYTSFLAQLKGSNAAKGTGSQSDEALDDLPSVTFISKKKSGDATMRDSEMVSKQKPDAGKEATNRKAFTVGIAAGDSENSDVCAMEEDEPEVEDAKKSSQKLNPSTGRKFRRSWRSLSCNGIVSS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00743 428 MobiDBLite consensus disorder prediction 343 365 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 1 89 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 254 268 - -
Cca07g00743 428 PANTHER BNAC09G30840D PROTEIN 1 417 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 108 122 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 340 367 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 103 122 - -
Cca07g00743 428 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 270 316 IPR029338 -
Cca07g00743 428 MobiDBLite consensus disorder prediction 173 277 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 16 60 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 194 209 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 381 413 - -
Cca07g00743 428 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 417 IPR029338 -
Cca07g00743 428 MobiDBLite consensus disorder prediction 67 89 - -
Cca07g00743 428 MobiDBLite consensus disorder prediction 210 227 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00743 - - gmx:100820108 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00743 07 11523959 11526207 Cca07g00743 07 11523959 11526207 ECH