Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00738 ATGGCACATTTGCAAGGAGTGGATCGGAAAAAGGGCGATGTAATCCGTTTAGAGCGCGAATCTGTCATTCCAATTCTGAAGCCTAAACTGATAATGACACTGGCCAATCTTATTGAACATAGTTCTGACCGGGGCGAATTTTTGAAGCTGTGCAAGAGAATAGAATACACGATTCGAGCTTGGTACCTTCTGCAATTTGAGGACTTGATGCAACTTTACTCCCTCTTTGACCCTGTACACGGGGCACAAAAGTTGGAACAACAGAAGCTAGCTCCAGAAGAAATTGATGTACTTGAACAGAATTTCTTGACATACCTATTTCAGGTCATGGAAAAGAGTAACTTCAAGATAGTGACTGATGATGAGATTGATGTTGCACATTCAGGCCAGTATCTTCTAAATCTTCCCATTACTGTTGATGAATCTAAGCTTGACAAGAAACTTCTGAAGAAATATTTTGAAGAGCATCATCACGATGACCTTCCAGATTTTTCTGATAAGTATGTTATCTTTCGGCGTGGAATTGGAATTGATCGAACAACTGACTACTTTGTCATGGAGAAAGTGGACATGCTTATTGGACGTTTTTGGGCATATCTGTTGAGACTAACAAGGTTGGAAAAACTTTTATCCAGGTCAAAAAGGCATAAGCATAATAAGAAGGATCCAAAGAAGGACAATGAAATTATCTCTGAATCAAATGGGAATGAATTTTATGTTGAACGGATACGTCTTGAAAATATGCAACTAAGTTTCCGTAACTTGCTGGGCAAGACCTTAATCCAAGAACCAACATTCGATAGGATAATTGTTGTCTACAGGAGAGCCAATACCAAATCAAAAGAAGATCGTGGAATATTTGTGAAGCATTTCAAAAACATACCAATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAACCCTGGATTAACTCCAATGGATTGGGTCAAGTTTCTTGGATCAGCTGTAGTTGGACTGGTTGCTGTAGTTAGTTCACTTGAAATGCCTACAGCTGATTGGTGGGTCATCATTGCTGTTCTCTCCACAGTAATTGGTTACTGTGCCAAGACATACTTCACGTTCCAACAAAACTTGGCTCAATACCAAAATTTGATTACTCAGTCAATGTATGACAAACAACTTGACAGTGGAAAGGGTACACTTCTTCATTTGTGTGATGATGTCATTCAACAGGAAGTCAAAGAGGTAATAGTTTCATTCTTTATTCTGATGGAACAGGGCAAAGCTACTAGACAGGATCTTGATCAATGGTGTGAGGAACTAATCAAAGAAGAGTTTAATGAGGAATGTAATTTTGATGTGGATGATGCCGTTCAGAAATTAGAGAATTTGGGAATTGTTACTCGGGATTCTGTTGGTCGGTATCAATGTGTGGGGCTGAGACGGGCTAATGATATCATTGGCACCACCACTGAAGAGCTTGTCCTTAAGGCAAAACAGGGAAACTTTACTCCTTGA 1482 0.3934 MAHLQGVDRKKGDVIRLERESVIPILKPKLIMTLANLIEHSSDRGEFLKLCKRIEYTIRAWYLLQFEDLMQLYSLFDPVHGAQKLEQQKLAPEEIDVLEQNFLTYLFQVMEKSNFKIVTDDEIDVAHSGQYLLNLPITVDESKLDKKLLKKYFEEHHHDDLPDFSDKYVIFRRGIGIDRTTDYFVMEKVDMLIGRFWAYLLRLTRLEKLLSRSKRHKHNKKDPKKDNEIISESNGNEFYVERIRLENMQLSFRNLLGKTLIQEPTFDRIIVVYRRANTKSKEDRGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAVVGLVAVVSSLEMPTADWWVIIAVLSTVIGYCAKTYFTFQQNLAQYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSFFILMEQGKATRQDLDQWCEELIKEEFNEECNFDVDDAVQKLENLGIVTRDSVGRYQCVGLRRANDIIGTTTEELVLKAKQGNFTP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00738 493 Pfam Protein of unknown function (DUF3754) 266 387 IPR022227 -
Cca07g00738 493 PANTHER AMINOPEPTIDASE (DUF3754) 8 490 - -
Cca07g00738 493 PANTHER AMINOPEPTIDASE 8 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00738 Cca-Chr7 11360210 11370297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00738 - - gmx:100819645 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00738 07 11360210 11370297 Cca07g00738 07 11360210 11370297 ECH
Cca07g00738 07 11360210 11370297 Cca08g01032 08 26129151 26142983 PCT