Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00729 ATGGCTGTTTCGTATGTTCACATGCTTCAATCTGCCAAGGGTTTCCACAAGCGTAACCTCTCCTATTCCAATAGCAGTTACAAGGGGAGGAGGAGCCACTGCGTTGTTTTTTCTTCTATGCATACATCAAACCCTAAGGTAGACTCATTACTGGACAGTGTAAAATGGGATAACAAAGGTTTGGCCGTGGCAATAGCTCAGAATGTTGACACAGGGGCCATATTAATGCAAGGTTTTGCAAATAGAGAAGCAGTGGCTACAACCCTATCTTCTCGAAAGGCCACATTCTATAGCCGATCACGATCTGCATTGTGGACCAAAGGAGAGACCTCTAATAATTTTATCAATGTTCATGATGTCTTTATTGATTGTGATCGTGATTCTATAATATACCTTGGGAAACCTGACGGGCCTACCTGTCACACGGGGGCAGAAACATGCTATTATACATCAGTTTTTGACTTGTTAAAACAGCAAGAGGATGAAGGAAATAAATTAGCATTAACCTCTTTGTATGGGTTAGAGTCAACAATCTCCCAACGTAAAACAGAGTTAGCAGAAACAGAAAATGAAAAGCCTTCGTGGACAAAGCGATTATTGCTTAATGATAAGTTGCTATGCTCTAAAATCAGAGAAGAGGCAAACGAGTTGTGTCAAACACTAGAGAATAATGAGGACAAGTCACGTACTGCATCAGAGATGGCTGATGTACTCTATCATGCCATGGTTCTGTTGGCAAAGAAAGATGTCAAAATTGAAGATGTTTTGCAGGTTCTTCGGCTGAGATTTTCCCAATCTGGCATTGAGGAGAAGAGAAGTCGTGTATCCCAAAAATCAATGGATGATTGA 849 0.4099 MAVSYVHMLQSAKGFHKRNLSYSNSSYKGRRSHCVVFSSMHTSNPKVDSLLDSVKWDNKGLAVAIAQNVDTGAILMQGFANREAVATTLSSRKATFYSRSRSALWTKGETSNNFINVHDVFIDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKQQEDEGNKLALTSLYGLESTISQRKTELAETENEKPSWTKRLLLNDKLLCSKIREEANELCQTLENNEDKSRTASEMADVLYHAMVLLAKKDVKIEDVLQVLRLRFSQSGIEEKRSRVSQKSMDD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00729 282 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 187 259 IPR021130 -
Cca07g00729 282 Gene3D - 43 140 IPR038019 -
Cca07g00729 282 Gene3D - 168 264 - -
Cca07g00729 282 Hamap Histidine biosynthesis bifunctional protein HisIE [hisI]. 52 264 IPR023019 GO:0000105|GO:0004635|GO:0004636
Cca07g00729 282 SUPERFAMILY all-alpha NTP pyrophosphatases 171 263 - -
Cca07g00729 282 TIGRFAM histidine_hisI: phosphoribosyl-ATP diphosphatase 172 259 IPR008179 GO:0000105|GO:0004636
Cca07g00729 282 SUPERFAMILY HisI-like 51 153 IPR038019 -
Cca07g00729 282 Pfam Phosphoribosyl-AMP cyclohydrolase 76 149 IPR002496 GO:0000105|GO:0004635
Cca07g00729 282 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 1 275 - -
Cca07g00729 282 Coils Coil 207 231 - -
Cca07g00729 282 CDD NTP-PPase_HisIE_like 171 259 IPR008179 GO:0000105|GO:0004636
Cca07g00729 282 PANTHER BNAC05G24080D PROTEIN 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00729 Cca-Chr7 11230721 11237330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00729 K11755 - gmx:100807276 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00729 07 11230721 11237330 Cca07g00729 07 11230721 11237330 ECH