Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00725 ATGGATCATGAGAAGAACGTGTGTGAAACAGAGGCGAACAAGCCTCTGCCACCTTTCTCACTTTCAACCCCAGAATCCTCACTCGCTCAACTCTACCCCAACACACCTGAAATTTTCACACGTTACAGTCCAAGTGTGATCAAAAGAATGGAAAATGACACGTGCCACACGTGCCATCAGAAGGGTCACTGGTCCTGGCACTGTCCACTCAAGTCCTCTAATGCAAGACCCTTCATCACCAACGATTCCCCTTGCGTCCACAACATATGGTGCCGCTGTGGCCACGGGCGTTGCGATGTGAGAACCGCAAAAAGTGTCAAAAACAGTGGCAGAAAGTACTACACTTGCCCCATCAAAAGGGGGGCGAAGTGTAAAGACTTTGTTAAATGGTGCGATGATCCCGTTGATGAGAGTGATTTGCAGCCTCCAGCGTTTAAGTATCCTGAGTGTGTGTGTCCTGCTGGAGTGTGTAGAAGGGTTAAAGCAATGCAGAACCTTGGTTCAGTTAAATACTGTTTTACTTGCCCTATTAAACAGTTTTTGTTTCGTGGGAATGGCAAGTTTTTGGATGATATTGGTTGCGATGATCAAATGAGGAATCTTACTGTTGGTGTGTAG 618 0.466 MDHEKNVCETEANKPLPPFSLSTPESSLAQLYPNTPEIFTRYSPSVIKRMENDTCHTCHQKGHWSWHCPLKSSNARPFITNDSPCVHNIWCRCGHGRCDVRTAKSVKNSGRKYYTCPIKRGAKCKDFVKWCDDPVDESDLQPPAFKYPECVCPAGVCRRVKAMQNLGSVKYCFTCPIKQFLFRGNGKFLDDIGCDDQMRNLTVGV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00725 205 Gene3D - 41 78 - -
Cca07g00725 205 Pfam GRF zinc finger 90 133 IPR010666 GO:0008270
Cca07g00725 205 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 23 186 - -
Cca07g00725 205 MobiDBLite consensus disorder prediction 1 20 - -
Cca07g00725 205 PANTHER OS07G0190500 PROTEIN 23 186 - -
Cca07g00725 205 SUPERFAMILY Retrovirus zinc finger-like domains 49 76 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00725 Cca-Chr7 11147295 11148048 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00725 - - gsj:114399244 189.119