Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00724 ATGGGGATGAAGAAGGCGTCGCCGGTGACGATGGATCACGTGTTGCTGGCGTCGCAGGAGACGAAGGAAGCGAGGGAGGTGAGGATTCGGTGCCTCTTCGATTTCTTCGACAGGGAGAATCGCGGGTTCTTGGATTACGAGCACATTGAGGAGGGTCTCTCGGCGCTGCAGATTCCGGCCGAGTATAAATACGCCAAGGATTTGCTTAACGCTTGCGATGCCAACAAGGATGGGAGAGTGGATTACCACGAGTTCAGGAAGTACATGGACAACAAGGAGTTGGAGCTTTATCGCATTTTTCAGGCCATTGATGTTGCGCATAATGGTTGCATTTTGCCCGAGGAGCTCTGGGAGGCACTTGTAAGAGCAGGGATTAAGATTGAGGATGAGGAACTCGCCCGTTTTGTTGAGCGTGTTGATAAGGATAATAATGGTGTTATAACATTTGAAGAATGGAGGGATTTTCTGTTGCTTTACCCTCATGAAGCAACCATTGAGAACATCTACCATTATTTGGAGCGGATGTGTATGGTTGATATTGGGGAACAGACTGTTATTCCAGCAGGCATTGGTAAGCACATTCATGCAAGCAGGTATCTGATTGCAGGAGGAGTAGCAGGTGCAGCATCACGCACAGCAACTGCACCCCTTGATCGTCTAAAGGTTGTGTTGCAAGTCCAAACAAAACGAGCTCATATAATGCCTGCAATAAAAGACATATGGAAAGAAGGTCGTTTCTTGGGATTTTTTCGAGGCAATGGCTTGAATGTAGTTAAGGTGGCCCCTGAGAGTGCTATTAGATTTTATACCTATGAGACGCTGAAGACCGTCATTTCAAGTGCCAAAGGGGGAGAGGCAAAGGGTGATATTGGAGGTACGGGGCGGCTGCTAGCTGGTGGTCTTGCTGGTGCTGTAGCTCAAACCGCAATATATCCCTTGGATCTTGTTAAAACACGACTACAAACCTTTGCTTGTGAAAGTGGTAGATTCCCCAATCTTGGAACCCTTTCAAAAGATATATGGGTTCAGGAAGGACCCCGAGCATTTTATAGGGGATTGATTCCTTCTCTTCTTGGGATTATCCCTTATGCTGGCATAGATCTTGCTGCGTATGAAACCTTGAAAGATATGTCCAAGACGTATATTCTTCATGATGGAGAACCTGGCCCTCTAGTACAATTAGGATGCGGCACTGTATCTGGAGCTCTTGGAGCAACATGTGTTTACCCACTGCAGGTGGTTAGAACAAGAATGCAGGCCCAACGCTCTTACAAGGGAATGGCTGATGTATTCAGGAAAACCTTGGAACATGAAGGCTTTAGAGGATTCTACAAAGGAATATTTCCTAACTTACTCAAAGTTGTACCTTCAGCAAGCATCACCTACATGGTTTACGAGTCTATGAAAAAAAGTTTGGATTTGGACTGA 1428 0.4615 MGMKKASPVTMDHVLLASQETKEAREVRIRCLFDFFDRENRGFLDYEHIEEGLSALQIPAEYKYAKDLLNACDANKDGRVDYHEFRKYMDNKELELYRIFQAIDVAHNGCILPEELWEALVRAGIKIEDEELARFVERVDKDNNGVITFEEWRDFLLLYPHEATIENIYHYLERMCMVDIGEQTVIPAGIGKHIHASRYLIAGGVAGAASRTATAPLDRLKVVLQVQTKRAHIMPAIKDIWKEGRFLGFFRGNGLNVVKVAPESAIRFYTYETLKTVISSAKGGEAKGDIGGTGRLLAGGLAGAVAQTAIYPLDLVKTRLQTFACESGRFPNLGTLSKDIWVQEGPRAFYRGLIPSLLGIIPYAGIDLAAYETLKDMSKTYILHDGEPGPLVQLGCGTVSGALGATCVYPLQVVRTRMQAQRSYKGMADVFRKTLEHEGFRGFYKGIFPNLLKVVPSASITYMVYESMKKSLDLD 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00724 475 PANTHER SOLUTE CARRIER FAMILY 25 43 475 - -
Cca07g00724 475 SUPERFAMILY EF-hand 21 169 IPR011992 -
Cca07g00724 475 ProSiteProfiles EF-hand calcium-binding domain profile. 127 162 IPR002048 GO:0005509
Cca07g00724 475 SMART efh_1 28 56 IPR002048 GO:0005509
Cca07g00724 475 SMART efh_1 64 92 IPR002048 GO:0005509
Cca07g00724 475 SMART efh_1 131 159 IPR002048 GO:0005509
Cca07g00724 475 SMART efh_1 95 123 IPR002048 GO:0005509
Cca07g00724 475 ProSiteProfiles EF-hand calcium-binding domain profile. 96 126 IPR002048 GO:0005509
Cca07g00724 475 ProSiteProfiles EF-hand calcium-binding domain profile. 24 59 IPR002048 GO:0005509
Cca07g00724 475 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Cca07g00724 475 Gene3D - 107 182 - -
Cca07g00724 475 PANTHER CALCIUM-BINDING MITOCHONDRIAL CARRIER PROTEIN SCAMC-1-B-LIKE 43 475 - -
Cca07g00724 475 Gene3D Mitochondrial carrier domain 190 473 IPR023395 -
Cca07g00724 475 Pfam EF-hand domain pair 28 89 IPR002048 GO:0005509
Cca07g00724 475 Pfam EF-hand domain pair 95 154 IPR002048 GO:0005509
Cca07g00724 475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 290 377 IPR018108 -
Cca07g00724 475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 194 277 IPR018108 -
Cca07g00724 475 Gene3D - 27 104 - -
Cca07g00724 475 Pfam Mitochondrial carrier protein 293 378 IPR018108 -
Cca07g00724 475 Pfam Mitochondrial carrier protein 193 279 IPR018108 -
Cca07g00724 475 Pfam Mitochondrial carrier protein 389 472 IPR018108 -
Cca07g00724 475 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Cca07g00724 475 ProSitePatterns EF-hand calcium-binding domain. 140 152 IPR018247 -
Cca07g00724 475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 388 471 IPR018108 -
Cca07g00724 475 SUPERFAMILY Mitochondrial carrier 192 466 IPR023395 -
Cca07g00724 475 PRINTS Mitochondrial carrier protein signature 199 212 IPR002067 GO:0055085
Cca07g00724 475 PRINTS Mitochondrial carrier protein signature 212 226 IPR002067 GO:0055085
Cca07g00724 475 PRINTS Mitochondrial carrier protein signature 252 272 IPR002067 GO:0055085
Cca07g00724 475 PRINTS Mitochondrial carrier protein signature 305 323 IPR002067 GO:0055085
Cca07g00724 475 PRINTS Mitochondrial carrier protein signature 350 368 IPR002067 GO:0055085
Cca07g00724 475 PRINTS Mitochondrial carrier protein signature 397 419 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00724 Cca-Chr7 11140114 11143792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00724 3 475 EF-hand Containing Proteins AT5G51050 73.629 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00724 K14684 - gmx:100775805 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00724 07 11140114 11143792 Cca07g00724 07 11140114 11143792 ECH