Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00715 ATGGAGGTACATTCTTCTCCTTTAGTGGCCAAGAGACTATGGAACGTGGTGAGGGTAACATTCTTCATGATAAGGAAGGGTCTTGTATCAAAGAGAAAGATGATCATGGACATGAATTTGATGATGAAGAAAGGGAAGGTGGTGAGAAAATCTCTGAGCAatctcatgtcatcatcatcgcatgatcatcatcaccaccaCAACTACAAGAACCCAAAGAACGTGACACGTGGCGGGTTCGGGGTGCACTATGAATTCTCGTGCAGCAATAGTCCAAACCCTGTTTTCTCCCACGTGCCAAAGCGCAAGCACCATTTCAACTTCCCCTGCATCAATGCCCCTGAGGTTGTTGAAGAGGAGGAACCAGATTTTTCATTCGAAGTTGAAAGTGATGTTCCTAAGGGTGTGGTCACGGTGCCCAAGACCCCAGAATACACGTTCAATTTTTTTGGTCAAAAGAGTCCTCTTCTCTCACCCTTCTCTGTGAGGGTGTCGAATTACTCTGCATTGGATGAGAATGAAGAGGTTGGAAATGATCTTGTTGATGATCAAGCAGAGGATTTCATCAGAAGGTTCTATGAACAGCTTAGGACGCAAAGCCCCGTGCAATTCCTACGTTACCAAGACATGTAA 633 0.4234 MEVHSSPLVAKRLWNVVRVTFFMIRKGLVSKRKMIMDMNLMMKKGKVVRKSLSNLMSSSSHDHHHHHNYKNPKNVTRGGFGVHYEFSCSNSPNPVFSHVPKRKHHFNFPCINAPEVVEEEEPDFSFEVESDVPKGVVTVPKTPEYTFNFFGQKSPLLSPFSVRVSNYSALDENEEVGNDLVDDQAEDFIRRFYEQLRTQSPVQFLRYQDM 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00715 210 Pfam Cotton fibre expressed protein 181 210 IPR008480 -
Cca07g00715 210 PANTHER OS01G0930500 PROTEIN 1 209 - -
Cca07g00715 210 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00715 Cca-Chr7 10837404 10838580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00715 - - gmx:100806803 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00715 07 10837404 10838580 Cca07g00715 07 10837404 10838580 ECH