Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00713 ATGAAGAACGGAACATCAAGGTTGCTGAAGCAGATCATAGCAAATCTGAGCTCAATGGCGAAGTCAAAAACCATGGCCTTGAAGTCTAAAACAAACTCCATCAGGGCTCGTTTGATCATATTCTCACTCATGAAGAACAAGAAGCTCTTGATGAGTTCCTTCTCTGAGAAGTTCCACTCCTTGTGGGGGCACAATTCTCAGCCCAAGGAATTGGAAGAGGGCAATGACCAAAGCAAGGCCATAGTGGTGTACACCAACAACAATGCACACTCCTATGAGGCCTTGCCAAACCCTAGTGAAACTCAAGTGGTGGAGGAACAAGACCAAGAAGGGTACGAGGGTTACTACAattatggcgatgatggtgatgatgatgatgatAAGTACCCGGATCTGACACACTCCCTTTTTGATTCTGAGGATTTGGATCTTGGAGGGTCGGTGATTGATTTGGTGAAGAATTCTAAGGAAGATGCGGGGGAAGAGTTTAAGCTGGAGGATGAGATTGACCTTGCTGCTGATCTTTTCATCTTGAAGTTCCGCAGGCAAATGGTGTTGCAGAAGCAAGAGTCTTTGAAGAGGAAGAGGGAAACGCAACAGCAAAATGGTGCATGA 615 0.4358 MKNGTSRLLKQIIANLSSMAKSKTMALKSKTNSIRARLIIFSLMKNKKLLMSSFSEKFHSLWGHNSQPKELEEGNDQSKAIVVYTNNNAHSYEALPNPSETQVVEEQDQEGYEGYYNYGDDGDDDDDKYPDLTHSLFDSEDLDLGGSVIDLVKNSKEDAGEEFKLEDEIDLAADLFILKFRRQMVLQKQESLKRKRETQQQNGA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00713 204 PANTHER COTTON FIBER PROTEIN 1 201 - -
Cca07g00713 204 Pfam Cotton fibre expressed protein 166 196 IPR008480 -
Cca07g00713 204 PANTHER EMB|CAB67623.1-RELATED 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00713 Cca-Chr7 10790279 10791543 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00713 - - gmx:100807332 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00713 07 10790279 10791543 Cca07g00713 07 10790279 10791543 ECH