Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00712 ATGACAAACGAAGCACGATACTGGGGTGAAAGTTCCAATTTGGCTTCTCTAAACAATCAAGAGGATACTCAGGATGATCATATGATTGCCCTTGTGCTTTCACAAGAGTATGCTAAATTGGATTGTGCAGTTGGTAGACGACTTTCCAACTTGGCGTCTATTCGTCATGTGCCACGCATAAACTCTTTTATCCCTAACACTAGTGATGCTAGCATGGATCATCATCGTCTTCTTCAGAGGTTGAACACTTATGGACTTTGTGAAGTTAAAATCTCTGGAGATGGAAATTGTCAGTTTCGTGCACTTTCAGATCAACTTTTCAAGTCACCTGAACATCACAAAAATGTTAGAAAAGAGATTGTAAAACAGCTCAAAGATCATCAGTCCTTATATGAATGTTATGTACCAATGAAGTATAAACAATATTGCAAAAAAATGGCAAAATCTGGAGAATGGGGGGACCATGTTACTTTGCAAGCAGCTAGTGATAAGTTTGCAGCAAAGATATGCCTTCTAACATCTTTCAAAAACAATTGTTTCATTGAAATTATGCCACTATATCAAGCACCAAAACGTGAGTTATGGTTAAGCTTCTGGTCTGAGGTTCATTACAATTCACTATATGACATTCGAGATACACCTATTCCACGTAAATCAAGGAGGAAACATTGGTTATTTTAG 681 0.3744 MTNEARYWGESSNLASLNNQEDTQDDHMIALVLSQEYAKLDCAVGRRLSNLASIRHVPRINSFIPNTSDASMDHHRLLQRLNTYGLCEVKISGDGNCQFRALSDQLFKSPEHHKNVRKEIVKQLKDHQSLYECYVPMKYKQYCKKMAKSGEWGDHVTLQAASDKFAAKICLLTSFKNNCFIEIMPLYQAPKRELWLSFWSEVHYNSLYDIRDTPIPRKSRRKHWLF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00712 226 PANTHER OS04G0402300 PROTEIN 12 226 - -
Cca07g00712 226 Pfam OTU-like cysteine protease 93 184 IPR003323 -
Cca07g00712 226 SUPERFAMILY Cysteine proteinases 71 211 IPR038765 -
Cca07g00712 226 Gene3D - 67 216 - -
Cca07g00712 226 ProSiteProfiles OTU domain profile. 86 210 IPR003323 -
Cca07g00712 226 PANTHER OTU DOMAIN CONTAINING PROTEIN 12 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00712 Cca-Chr7 10749389 10759246 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00712 - - gmx:100814418 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00712 07 10749389 10759246 Cca07g00712 07 10749389 10759246 ECH