Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00707 ATGATTCCTCCTGTGTACTATAACTCAGTCTCTGTTCATCTGGGTGGACTTTTCTGTGACCCTCTGCACCCATTTGCGTTGGATCTCACTCTGAATAAGTCTCGTTCTTCTGCTTCTCTGTTTTGGAATTGCAAGAGGAGAAGGAAGAGGGAAAACTCTATCATCATGGCTTCAAATTTGAGGACCAACAATTTCCTGCGCCACGTGGAATCAATGAAGCTTCATCCATCAGGTGCTGGCCACATTTCACACTTGAACGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTTCTAGCCAAGCCAATGTTCAATCCCCAGAACAGTATCTAGAGATGTATAAGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTACTGGAAACAGAAATGGGGAGAAAAAGTGTGTGATGAAAATTTTGATGTTAGGAAAGGGAATATCAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTAGCCATTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACAGTCAGCTTCTCCATCAAGTTTGCCAGCTTGCAAACTACTTGAAAGATATTGGTGTGAAGAAGGGAGATGCTGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATTGCAATGCTTGCCTGTGCTCGCATTGGTGCAGTTCACTCGGTTGTATTTGCCGGTTTTTCCGCAGAAGCTCTTGCCCAGAGAATCACTGATTGTAAACCAAAAGCTGTAATTACTTGCAATGCTGTTAAAAGGGGCCCTAAGCCTATATATCTGAAAGATATTGTTGATGCTGCAATCAACGATTCAGCCCAAAATGGGGTCTCTATAGATGTATGCCTAGTTTATGACAACCCATTGGCAATGAAGAGGGAAGATACAAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTTGTTCCTCAATATCCAACTTCTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACGTTTAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGACACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCGTCTGTTGTTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGCGATGCTGGGACATTGTTGACAAATTTAAAGTGTCAATATTCTACACTGCCCCCACATTGGTGCGGTCCCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCTTTAAGAGTCCTAGGAAGTGTAGGCGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTCGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACTGGTGGCTTCATGATAACTCCATTACCAGGAGCTTGGCCACAAAAACCTGGTTCTGCAACTTTCCCCTTCTTTGGAGTTCAGCCTGTCATTGTGGATGAGAAAGGTGTTGAAATAGAAGGTGAGTGCAGTGGATATTTGTGTGTTAAGAAATCATGGCCTGGGGCATTCAGAACACTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCGGGATACTATTTCAGTGGCGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCACTGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGAATTGGCACAGCAGAAGTGGAATCAGCTCTAGTTTCACATCCTCAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAAGGTATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAACAACTGCGGAAGGACCTCGTACTCATGGTTCGAAAGCAGATAGGAGCTTTTGCAGCACCTGACAAAATTCATTGGGCACCTGGCCTCCCAAAAACAAGGAGTGGAAAAATAATGCGAAGAATTCTGAGGAAAATTGCTTCCAGGCAGCTGGATGAACTTGGGGATACAAGTACCCTTGCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA 2262 0.4443 MIPPVYYNSVSVHLGGLFCDPLHPFALDLTLNKSRSSASLFWNCKRRRKRENSIIMASNLRTNNFLRHVESMKLHPSGAGHISHLNAVILGESLATEEDDFVLPSEDFSSQANVQSPEQYLEMYKRSIEDPAGFWSEIASEFYWKQKWGEKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGTLTYSQLLHQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALAQRITDCKPKAVITCNAVKRGPKPIYLKDIVDAAINDSAQNGVSIDVCLVYDNPLAMKREDTKWKEGRDIWWQDVVPQYPTSCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVVVYEGAPNYPDAGRCWDIVDKFKVSIFYTAPTLVRSLMRDGDAFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTVVDGVPYSEQLRKDLVLMVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADS 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00707 753 CDD ACS 118 740 - -
Cca07g00707 753 Pfam AMP-binding enzyme C-terminal domain 637 715 IPR025110 -
Cca07g00707 753 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 115 749 IPR011904 GO:0003987|GO:0016208|GO:0019427
Cca07g00707 753 ProSitePatterns Putative AMP-binding domain signature. 367 378 IPR020845 -
Cca07g00707 753 Gene3D - 101 623 IPR042099 -
Cca07g00707 753 Pfam Acetyl-coenzyme A synthetase N-terminus 120 180 IPR032387 -
Cca07g00707 753 PANTHER ACETYL-COENZYME A SYNTHETASE 73 753 - -
Cca07g00707 753 Gene3D - 624 753 IPR045851 -
Cca07g00707 753 SUPERFAMILY Acetyl-CoA synthetase-like 108 748 - -
Cca07g00707 753 Pfam AMP-binding enzyme 189 628 IPR000873 -
Cca07g00707 753 PANTHER ACETYL-COENZYME A SYNTHETASE 73 753 - -
Cca07g00707 753 Hamap Acetyl-coenzyme A synthetase [acs]. 97 751 IPR011904 GO:0003987|GO:0016208|GO:0019427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00707 Cca-Chr7 10644504 10652485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00707 62 752 Acyl Lipid Metabolism Gene Families AT5G36880 85.094 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00707 K01895 - gmx:100789257 1483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00707 07 10644504 10652485 Cca07g00707 07 10644504 10652485 ECH