LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca07g00706	ATGGAATTGGCAATGAAGGTGGCCGAGGCCGTCCATGTGCTCAACCACGATACCCAATCCTGCAACCGCGTCGCAGCCAATCAGTGGCTCGTTCAGTTCCAACAGACCCAcgccgcctgggacgtcgccaccgccatcctcgccgccgatcgccgcctccccctcgcctccAATTTCGAGGTCGAGTTCTTCGCCGCGCAGATTCTCAAGCGCAAGATACAAAATGAAGGTTATCTACTGCAGTTAGGAGCTAAGGATGCTTTGTTAAATGCCCTTCTTATTGCAGTCAAAAGATTCAGTACTGGTCCACCTCAGCTTTTGACACAGATCTGTCTTGCACTCTCGGCTCTTGTACTTCAAGTTGCTGCACATGGAAACCCTATTGAGCAGCTTTTTTACAGTCTACGGAATCTGCAGAGCCAAGATGATGGCAATATTGCTGTCCTGGAGATGCTCACTGTCCTTCCAGAGGAAGTCGTTGACAACCAACGTATTGATTCTAAGATTAGTTCATTACACAAAAGCCATTATACCCAAGAGCTTCTCTCCCATACACCTATGGTTCTTGAATTCTTGCTGCAGCAGTCTGAAATAAATTTTGATGGTTCTGTGCAACAACATGAAAGGAACAGGAAAATTTTACGTTGCTTATTGAGTTGGGTTAAAGCAGGTTGCTTCTCTGAGATTTCTCCAGGAACATTGCCAGCTCACCCACTTCTAAATTTTTTGTTCAACTCATTGCAGGTTCCTTTATCATTTGATCTAGCCATTGAAGTTCTCGTTGAACTTGTGACTAAACAGGAGGGAGTGCCCCAAATTTTGTTGTGCAGAGTACATTATCTGAAGGAAGTACTTCTTTTTCCAGCTCTTACTAGGGGAGACATGAAAGTAATTGGTGGCCTTGCTTGCTTGTTATCAGAAATTGGGCAGGCTGCTCCGTCTCTAATTGTAGAAGCAAGTGCAGAGGCCCTAGCCCTAACAGATTCCCTATTGAGCTGCGTGGCATTTCCAAGTGAAGATTGGGAGATTGCAGACTCAACTCTGCAGTTTTGGTCCACTCTTGCAAGCTATATACTTGGTATTGATGAAGATGGTGCAAAAAGTAGAAAACACGTGCAAGATATTTTTTCTCCCGTGTTCTCAACATTACTTGATTCGCTGTTGTTGCGTTCTCAGGTGGATGATTCTACATACAATGATGAGGGAAGAGTAGTTGATTTGCCTGATGGCCTTATTCATTTCAGGATGAACCTAGTAGAGCTTTTGGTGGATATATGTCACCTGTTAGGCTCTGCTACATTTATGCAAAAGCTCTTTATTGGTGGGTGGGCATCTCAGAATCTATCAATCCCATGGAAGGAAGTGGAAAGCAAGCTATTTGCTCTTAATGCTGTTGCTGATGTCATCATACAGGATGGCCAAAGTTATGATTTCTCTGTAGTTATGCAGTTGGTGACCATGTTGTCCACTAAACCTTCTGATGGCGTGAACGGTTTCATTTGCATTGTATACAGATCTCTAGCAGATGCTGTTGGTTCTTATTCCAAGTGGGTGTCTACTTTTAAGGAAAATTTTAGAGCCTTGCTATTATTTCTTGCTGTTGGGATTTCAGAACCACTATCTTCAAATGCGTGTGCATCTGCCTTGCGTAAAGTCTGTGAAGATGCTTCTGTAGTAATTTATGAACCTTCAAATTTGGAAATTTTAATGTGGATAGGAGAGGGTTTAGAGAAGTGGCATTTGTCTTTGGAAGATGAGGAAGAAGTCATGCATGCAATAAGTCTGGTCCTTGGTTCTGTTCCCAATCGAGAATTAAAGAATAACTTATTGGCTAGATTGCTTTCATCTAGCTATGAAGCTATTGGGAAACTTGTTGATCCAGAGATCAGCCTTTCTCTGAAACAGAGTCCAGCTTCTTATACACAAGTTCTGAATGCTGCTTCTAGAGGGTTGCACAGAATGGGAACTGTATTCAGTCATCTTTCCATATCCGTGGCAACTGAACCTGCTGCAGATGACTCAATACTTTCACTGCTAAGGGTTTTCTGGCCCATTTTGGAGAAAATTTTTGGCTCTGAGCATATGGAGAATGGCAATTTATCTGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCAATCTTCAGGTCAGCATTTTGTGACCTTACTGCCCAAAGTGCTGGACTGGCTCTCGACAAATTTTGTTTTGTTTCAAAGTCATGAATGCTATATAAGAACCGCTTCCATTGTCATTGAAGAATTTGGTCACCTAGAGGAGTACGGACCTTTATTTGTCACTTTGTTTGAAAGATTTACTCATGCAGCTTCTGTAATGGCCCTAACTTCCTCCTATATATGTGACCAAGAACCTGACTTAGTGGAGGCCTACACCAATTTTGCATCAACATTTATCCGATCCTGTAACAAGGATGCCCTGTCAGCTTGTGGTTCTCTTCTTGAAGTTTCTATACAAAAGGCAGCTATTTGTTGCACAGCCATGCACCGTGGTGCAGCACTTGCTGCAATGTCATACTTGTCTTGTTTCTTAGATGTCGGCCTTGTCTCTTTGTTAGAATGTATGAATTCTATTGCTGAGGATTCATTCAACGTCACAGCCATTCATGTCATATCTCACAGTGGTGAGGGGCTTGTTTCTAATGTGGTGTATGCTTTACTCGGTGTGTCTGCAATGTCACGGGTTCACAAGTGTGCAACAATTTTGCAGCAACTAGCAGCAATTTGCACTTTATCTGAGAGAACAACGTGGAAGGCTATACTTTGCTGGCAAACTCTTCATCGATGGCTGCATTCAGCGGTTCAGGCTCTTCCTGCCGAATACCTAAACCATGGAGAAGCAGAGGCCATAGTGCCACTTTGGTCCAAGGCCCTTGCTGACGCAGCCACTGACTATCTTGAGAGCAAGAACTCTGACGGATTAAAGAGTGATTTTGGGCATATGCAAGGGAAGGGTGGCAGAGTTTTAAAGCGGCTGGTTCGGGAATTTGCTGATGCTCACCGAAATATTCCAAATCTAACTTGA	3039	0.4215	MELAMKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATAILAADRRLPLASNFEVEFFAAQILKRKIQNEGYLLQLGAKDALLNALLIAVKRFSTGPPQLLTQICLALSALVLQVAAHGNPIEQLFYSLRNLQSQDDGNIAVLEMLTVLPEEVVDNQRIDSKISSLHKSHYTQELLSHTPMVLEFLLQQSEINFDGSVQQHERNRKILRCLLSWVKAGCFSEISPGTLPAHPLLNFLFNSLQVPLSFDLAIEVLVELVTKQEGVPQILLCRVHYLKEVLLFPALTRGDMKVIGGLACLLSEIGQAAPSLIVEASAEALALTDSLLSCVAFPSEDWEIADSTLQFWSTLASYILGIDEDGAKSRKHVQDIFSPVFSTLLDSLLLRSQVDDSTYNDEGRVVDLPDGLIHFRMNLVELLVDICHLLGSATFMQKLFIGGWASQNLSIPWKEVESKLFALNAVADVIIQDGQSYDFSVVMQLVTMLSTKPSDGVNGFICIVYRSLADAVGSYSKWVSTFKENFRALLLFLAVGISEPLSSNACASALRKVCEDASVVIYEPSNLEILMWIGEGLEKWHLSLEDEEEVMHAISLVLGSVPNRELKNNLLARLLSSSYEAIGKLVDPEISLSLKQSPASYTQVLNAASRGLHRMGTVFSHLSISVATEPAADDSILSLLRVFWPILEKIFGSEHMENGNLSVAACRALSLAVQSSGQHFVTLLPKVLDWLSTNFVLFQSHECYIRTASIVIEEFGHLEEYGPLFVTLFERFTHAASVMALTSSYICDQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLECMNSIAEDSFNVTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAILCWQTLHRWLHSAVQALPAEYLNHGEAEAIVPLWSKALADAATDYLESKNSDGLKSDFGHMQGKGGRVLKRLVREFADAHRNIPNLT	1012

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca07g00706	1012	Pfam	Exportin 1-like protein	103	260	IPR013598	-
	Cca07g00706	1012	PANTHER	ARM REPEAT SUPERFAMILY PROTEIN	1	1011	-	-
	Cca07g00706	1012	Gene3D	-	3	967	IPR011989	-
	Cca07g00706	1012	PANTHER	TRANSPORTIN 3 AND IMPORTIN 13	1	1011	-	-
	Cca07g00706	1012	SUPERFAMILY	ARM repeat	1	879	IPR016024	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca07g00706	K15436		-	gmx:100808691	1890.93

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca07g00706	07	10621693	10639335	Cca07g00706	07	10621693	10639335	ECH