Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00677 ATGTTAATTTTCCTGAGAACTTTCCAAGTTGCTTATATTCTATTTTGGGAAGATTTTGTGTTTTCTCATGTGATTTCTGGAATTTTGCAGATGAACCTAAGAATAGGGAAAGTTCAGAAATGGTGGGAAAAGGGGCTTCAACCCAACATGAGAGAGGTCACTTCAGCAGAAGATCTTGTGGAATCACTGTTAAACGCAGGGGACAAATTGGTGGTAGTTGATTTCTTCTCTCCTGGTTGTGGTGGCTGCAAAGCCCTTCATCCTAAGATATGTCAATTAGCAGAGATGAATCCTGATGTTCAGTTCCTTCAGGTGAACTATGAGGAGCATAAGTCCATGTGTTACAGCCTCAATGTCCATGTTCTTCCATTCTTCCGCTTTTATAGAGGTGCTCATGGTCGATTATGCAGCTTTAGCTGCACCAATGCCACGGTTAGTGTACATGCTATGTCAATTTTATATTTCATATCTGGCTTGATAATATTATGCCTAATTTGGTTAATTCATATTATGCTTGTGTGA 522 0.3946 MLIFLRTFQVAYILFWEDFVFSHVISGILQMNLRIGKVQKWWEKGLQPNMREVTSAEDLVESLLNAGDKLVVVDFFSPGCGGCKALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATVSVHAMSILYFISGLIILCLIWLIHIMLV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00677 173 Pfam Thioredoxin 61 131 IPR013766 -
Cca07g00677 173 Gene3D Glutaredoxin 38 142 - -
Cca07g00677 173 CDD TRX_family 66 130 - -
Cca07g00677 173 PANTHER THIOREDOXIN, MITOCHONDRIAL 29 146 - -
Cca07g00677 173 PANTHER THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC 29 146 - -
Cca07g00677 173 ProSiteProfiles Thioredoxin domain profile. 29 161 IPR013766 -
Cca07g00677 173 SUPERFAMILY Thioredoxin-like 39 130 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00677 Cca-Chr7 9859684 9861683 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00677 - - gmx:100816892 240.35