Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00675 ATGGAAAAAAAgtgggttttgagattggtgttggtgttggtggtgggtgtgatgTGTTGTCATGTGGAAGGGCTTGGTGTGAATTGGGGGACTCAAGCAACCCACAAGTTGCCACCAGACACTGTGGTTCAAATGTTGAAGGATAATGGGATTCAGAAAGTGAAGCTTTTTGATGCAGATGACTCCACCATGAGTGCTTTGGCCGGGACTGGGATTGAAGTCATGGTTGCTATCCCTAATAACCAGCTTGCTGAGATGAATGACTATGACAGAGCCAAACAGTGGGTTAAGAAGAATGTCACACGTTACAGCTTCAATGGAGGAGTTAATGTCAAGTATGTAGCAGTTGGGAACGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAATATCACCTTCCCTGCACTGCAGAACATTCAAAATGCCCTTAACGAAGCAGGTCTTGGAGACACCGTTAAGGCCACAGTGCCCTTAAATGCAGATGTGTATCAGTCACCAGAGAGCAACCCTGTTCCATCTGCAGGAATATTTAGGCCTGATATCACTGGTCTCATGACCCAAATAGTCCAATTTCTCAGCAAGAATGGTGCACCATTCACCGTGAACATCTACCCCTTCTTGAGTCTTTATGGCAATGACAATTTTCCCTTCAACTACGCCTTCTTTGACGGTGTAGACAACCCCATAAACGACAACGGAACACCATACACGAACGTGTTCGACGCGAATTTCGACACCTTGGTTGCTGCTCTCAAATCAGTAGGATATGGTGACCTGCCAATTCTGGTGGGAGAAGTAGGATGGCCTACAGAAGGGGACAAGAATGCCAATGTTGGCAATGCTTTGAGATTCTACAATGGCCTTCTGCCAAGGCTTGCAGCAGACAAAGGCACGCCGCGCCGACCGGGACACATCGAAGTTTATCTCTTCGGACTAGTCGATGAGGATGCCAAGAGCATTGCTCCGGGAAACTTCGAACGCCACTGGGGGATTTTCCGGTATGATGGACAACCAAAGTTTCCAATGGACCTCTCTGGCCAGAACCAAAACAAGTTTCTGATAGGTGCACAGAATGTGAAGTATCTTGCTCCAAGGTGGTGCATGTTTAACCCTGATGCAAAGGATCTTAGCAAGCTTGCTGATAACATTAACTATGCTTGCACCTTTGGAGATTGCACTGCACTTGGATATGGCTCTTCTTGCAACAATTTGGATGCTAATGGTAATGCCTCTTATGCGTTTAACATGTACTTTCAGGTGCAGAATCAGAACACCATGGCATGCAATTTTCAGGGCTTGGCTAAGCTTACTACGAACAATATCTCAACTCCTACGTGCAATTTTATCATTCAGATAGTTCCTTCTTCTGCCTCTTATTTGGTGCCTTCGCTTGTTGGTGTCTTGTTTGTTTCTTTATTCATGATTTTGTTTTCGTAG 1440 0.4375 MEKKWVLRLVLVLVVGVMCCHVEGLGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDADDSTMSALAGTGIEVMVAIPNNQLAEMNDYDRAKQWVKKNVTRYSFNGGVNVKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEAGLGDTVKATVPLNADVYQSPESNPVPSAGIFRPDITGLMTQIVQFLSKNGAPFTVNIYPFLSLYGNDNFPFNYAFFDGVDNPINDNGTPYTNVFDANFDTLVAALKSVGYGDLPILVGEVGWPTEGDKNANVGNALRFYNGLLPRLAADKGTPRRPGHIEVYLFGLVDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQNQNKFLIGAQNVKYLAPRWCMFNPDAKDLSKLADNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYFQVQNQNTMACNFQGLAKLTTNNISTPTCNFIIQIVPSSASYLVPSLVGVLFVSLFMILFS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00675 479 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 466 IPR044965 GO:0004553|GO:0005975
Cca07g00675 479 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Cca07g00675 479 Gene3D - 363 460 - -
Cca07g00675 479 SMART X8_cls 366 449 IPR012946 -
Cca07g00675 479 Pfam Glycosyl hydrolases family 17 25 344 IPR000490 GO:0004553|GO:0005975
Cca07g00675 479 Gene3D Glycosidases 24 353 - -
Cca07g00675 479 Pfam X8 domain 367 435 IPR012946 -
Cca07g00675 479 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Cca07g00675 479 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00675 Cca-Chr7 9797025 9800707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00675 1 454 Miscellaneous Gene Families AT1G64760 76.211 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00675 - - gmx:100815300 907.516