Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00673 ATGGTTCTGACTGCTGTCATGGTGTCATCCTGCTCCAGGCCAGTAAATGTCGTAGGCTGGAAACGTGCTATATGTTTGGAGTTTATGGAGAAGGCTGATGTACTGGAGTATTATGCTAAGACAGTGAACTCCCCCAGTGGATCTTTCTATATACCAGCTGTCTTGAGGGTTCCTCATTTACTTCAGGTTGTTAAAAGAAGAATAGTAAAAAACAATCTCAGTCGGAAAAATATACTATTTCGGGACAATTACACCTGTCAGTATTGCTGTTCACGTGAGAATTTGACCATTGATCACGTTTTGCCCGCTGCACTAGGTGGAGAATGGACATGGGAAAATCTAGTGACTGCTTGTGCCAAATGCAACTGCAAAAAGGGTAAAAAAACTTTAGAGGAAGCTAAAATGAAGTTGATCAAGGCCCCAAAGGTCCCAAAGGACTATGACATTCTTGCCATACCTCTAACTGCCGCAGCTCTAAGAATGCTGACAATAAGAAAGGGAACACCTGAAGAATGGCGTCAGTATCTAAGGTCTCCTTGA 540 0.4278 MVLTAVMVSSCSRPVNVVGWKRAICLEFMEKADVLEYYAKTVNSPSGSFYIPAVLRVPHLLQVVKRRIVKNNLSRKNILFRDNYTCQYCCSRENLTIDHVLPAALGGEWTWENLVTACAKCNCKKGKKTLEEAKMKLIKAPKVPKDYDILAIPLTAAALRMLTIRKGTPEEWRQYLRSP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00673 179 Pfam HNH endonuclease 86 136 IPR029471 -
Cca07g00673 179 Gene3D - 61 148 - -
Cca07g00673 179 CDD HNHc 75 126 IPR003615 -
Cca07g00673 179 PANTHER SLL1193 PROTEIN 13 178 - -
Cca07g00673 179 SMART HNH_5 73 123 IPR003615 -
Cca07g00673 179 PANTHER SLL1193 PROTEIN 13 178 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00673 - - gmx:100787021 329.717