Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00658 ATGCAATCCCACTTTCTGGTGGGACCCATCTCCGTCGGCCGCTATGGTGGCGCCGCCGATTCCAGCCCTTTCCACTCCGCCTGGACCAACCCTCCCCGCCGGCGGTCCCCACTCGTCGTCGCCTCCTCAACGCCCGCGGCCATCAACGGCGGGCCGAACCACTACGCCGTCCTCGGCGTCGCCCGCACTGCCTCCGCCGTTGATATCAAACGCGCCTATCGCCTCCTCGCCCGCAAGTATCATCCTGATGTTAGCAAGGATCCACATGCTGCGGAATTATTCAAGACAATCCATCATGCATATGAGGTACTATCTAATGCAACAACGAGAGTTCAGTATGATCAAGAACTTCAATTCGGTGACAAGCCTTACAGGGAAAAATGGAGTTACAGCACTGAATTTGAAGATCAGGTAAGAGTTTATAGGTGGGCCCACCTGAGGAGAAAAATGCATAATGAAAGATACTGGGAGCATTCCAATGTTAATGAGGACTACTATACCAGTGAAACAGACGAGGAAGAAGATGAAGGAAATTTAGATGAAGAAAGGGGTTCCTTTACTGAAGTGCTTAGATCGGCATTCGTCTCATTATTTTTGTTTCAGACATTTGGATCACGACTCTCACTTACATTTAGTGGTCTGACGGCTTTGTTTGATAAGAAGTTAGACTCCGGCTACAAAATTGGCTATGCAATAGCATGGATTTTGGGTGGGAGGGGAGGCATATTGCTAACCCTGTGCTTGTCATTTGCAAGTTGGGTTTGTGGGAAAACAAGTAGCAGCGTAGTTGCACTAGTTGTGGTGGCCATGTGGGTTGGCACCTACCTTGCAAGGTACGCACCACTTCCCCAAGGTGCGCTATTAGCTCTTCTCTACATGTCAATTAAGCTACAATCTGACCTAATATAA 909 0.4917 MQSHFLVGPISVGRYGGAADSSPFHSAWTNPPRRRSPLVVASSTPAAINGGPNHYAVLGVARTASAVDIKRAYRLLARKYHPDVSKDPHAAELFKTIHHAYEVLSNATTRVQYDQELQFGDKPYREKWSYSTEFEDQVRVYRWAHLRRKMHNERYWEHSNVNEDYYTSETDEEEDEGNLDEERGSFTEVLRSAFVSLFLFQTFGSRLSLTFSGLTALFDKKLDSGYKIGYAIAWILGGRGGILLTLCLSFASWVCGKTSSSVVALVVVAMWVGTYLARYAPLPQGALLALLYMSIKLQSDLI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00658 302 PRINTS DnaJ domain signature 55 73 IPR001623 -
Cca07g00658 302 PRINTS DnaJ domain signature 73 88 IPR001623 -
Cca07g00658 302 PRINTS DnaJ domain signature 89 109 IPR001623 -
Cca07g00658 302 Pfam DnaJ domain 53 114 IPR001623 -
Cca07g00658 302 SMART dnaj_3 52 109 IPR001623 -
Cca07g00658 302 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Cca07g00658 302 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 26 288 - -
Cca07g00658 302 Gene3D DnaJ domain 52 198 IPR036869 -
Cca07g00658 302 ProSiteProfiles dnaJ domain profile. 53 117 IPR001623 -
Cca07g00658 302 SUPERFAMILY Chaperone J-domain 52 124 IPR036869 -
Cca07g00658 302 CDD DnaJ 53 106 IPR001623 -
Cca07g00658 302 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 26 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00658 Cca-Chr7 9534154 9541529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00658 52 118 Miscellaneous Gene Families AT5G49580 43.662 1.61e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00658 - - gmx:100791619 455.292