Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00657 ATGTCAACTCTGAGCAATTCAACAAATATATTTTGGCAAGATTGTCAAGTAGGAAGGCCTGAAAGGCAGAAGTTACTTAACCAAAAGGGATGTGTTGTATGGATTACTGGACTCAGCGGATCAGGAAAAAGCACATTGGCATGTTCCCTAAGCAGAGAACTATACACAAGGGGAAAGTTATCTTATGTCCTTGATGGAGATAACCTTCGGCATGGACTAAACAAGGATCTTGGTTTTCTACCTGAAGATCGCACTGAAAATATTCGCAGAACTGGAGAAGTTGCAAAACTCTTTGCCGATGCTGGTTTAATATGTGTTGCTAGTCTGATATCTCCTTACAGAAGAGACCGAGACAGTTGCCGTGCCATGTTACCTGATGCGAATTTTATTGAGGTCTACATGAACATGCCTCTAGAATTGTGTGAGTCAAGAGATCCAAAAGGCCTCTATAAGCTTGCTCGGGCAGGAAAAATCAAAGGTTTTACCGGCATCGATGATCCTTATGAACCACCCATAAATTGTGAGATTGAAATCAAGCATGATAATGGTGTTTGTCCAACACCAACTGTGATGGCTGGACAAGTGGTTACTTACTTGGAGAAGAAAGGATTTCTTGAACATTAG 624 0.4135 MSTLSNSTNIFWQDCQVGRPERQKLLNQKGCVVWITGLSGSGKSTLACSLSRELYTRGKLSYVLDGDNLRHGLNKDLGFLPEDRTENIRRTGEVAKLFADAGLICVASLISPYRRDRDSCRAMLPDANFIEVYMNMPLELCESRDPKGLYKLARAGKIKGFTGIDDPYEPPINCEIEIKHDNGVCPTPTVMAGQVVTYLEKKGFLEH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00657 207 Pfam Adenylylsulphate kinase 29 182 - -
Cca07g00657 207 Gene3D - 2 206 IPR027417 -
Cca07g00657 207 CDD APSK 32 179 IPR002891 GO:0000103|GO:0004020|GO:0005524
Cca07g00657 207 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 1 206 - -
Cca07g00657 207 TIGRFAM apsK: adenylyl-sulfate kinase 13 182 IPR002891 GO:0000103|GO:0004020|GO:0005524
Cca07g00657 207 Hamap Adenylyl-sulfate kinase [cysC]. 28 203 IPR002891 GO:0000103|GO:0004020|GO:0005524
Cca07g00657 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 201 IPR027417 -
Cca07g00657 207 PANTHER ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00657 Cca-Chr7 9518273 9523560 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00657 K00860 - gmx:100793200 401.749