Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00646 ATGGCCACCGATCGGAGGCAGAGCGAGGCCCAAGTGGCCCTTATCCTGGGGCCGGATTCCAGCCACCTGGAATCCCTAATCTCGCACTTGATGTCTTCATCCAACGAGGAACGCTCCCAGGCAGAGTCCCTCTTCAACCTCTGCAAACAGACTCACCCGGAGTCCCTCCTCATGGGCCTCGCCCACCTCCTACACTCCTCCCCTAATCCAGAGACTCGCACCATGTCCGCCATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACGCCTTCCTCTGGCCCCTCCTCTCCCCCTCCGCCCGCTCCACGCTCCACTCCCTCCTCCTCTCCTCCCTCCACAAAGAGCCTCTCAAATCCATCGCCAAGAAACTTTGCGACACTGTTTCCGAACTAGCCGCCGCCATCCTCCCGGAGGACGCCGCCGCCTGGCCCGACCTCCTCCCGCTCCTCTTTCAGTGGGTAACATCCCCCGAGGCGCGGCTGCAGGAAATCTCGCTCCTCGTCTTCGCGCAATTGGCGCATTACATAGGCCAAACCCTACTCCCTCAATTGTCCACTCTCCACTCGGTTTTCCTCCGCTGCCTCCACTCCTCCACGCCCTCCGACGTCCGCATCGCCGCCCTCGCCGCCAGCATCAACTTCGTCCAGTGCCTCTCTAGTCCTTCCGACCGGGACCGCTTCCAGGACCTGCTCCCTCTCATGATGCAGACGCTCACCGAGGCGCTCAACTCCGGCCAGGAGGCCGTCGCGCAGGAGGCGCTCGAGCTTCTCATCGAGCTCGCCGGCACCGAGCCGCGGTTCCTCCGCCGCCAGATTGCGGACGTCGTCGGCGCCATGCTGCAGGTCGCCGAGGCCGAGGCCTTGGAGGAGGGGACTCGCCACTTGGCTATCGAATTCGTCGTGACCCTCGCCGAGGCCAGGGAACGTGCCCCTGGGATGATGAGAAAGTTGCCGCAGTTTGTGAGGAAGCTCTTTGGCGTGTTGATGAATTTGTTGCTGGATATCGAGGATGATCCGGCGTGGCATGCTGCAGTGGATGAGGATGAGGATGCGGGTGAGACAAGTAACTATGGGTTTGGACAGGAGTGTTTGGATAGGCTTTCCATATCGTTGGGTGGCAACACTATTGTGCCGGTTGCTTCTGAGTTGCTGCCAACTTTCTTGGCTGCTCCTGAGTGGCAAAAGCACCATGCTGCGCTCATTGCACTTGCGCAGATTGCGGAGGGTTGTTCAAAGGTGATGATAAAGAATCTGGAGCAGGTTTTGTCAATGATTTTAAATTCATTTCACAATCCCCATCCTCGAGTGCGTTGGGCAGCTATAAATGCAGTTGGGCAATTGTCCACAGATTTGGGGCCAGACTTGCAGGTTAAATTTCACCACTTAGTGCTGCCTGCGTTGGCTGGAGCCATGGATGATTTTCAAAATCCAAGAGTACAGGCTCATGCTGCTTCTGCAGTGCTAAATTTCACTGAGAATTGTACCCCAGATATCCTAACACCTTACTTAGATGGGATTGTGAGCAAACTTTTGGTACTCCTGCAGAATGGGAAGCAAATGGTTCAAGAAGGGGCTTTGACCGCTTTAGCATCAGTGGCAGATTCTTCTCAGGTGCAATTTCAGAAGTATTATGATGCTGTGATGCCATACTTAAAAGCTATTCTGGTGAATGCAAATGATAAATCTAATCGTATGCTTCGTGCCAAAGCAATGGAGTGCATTAGTTTGGTAGGAATGGCTGTTGGAAAGGATAAGTTCAGGGAAGATGCCAAACAGGTAATGGATGTCTTGATGTCACTGCAACAATCCCAACTGGATGCTGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTTGGACAGGATTTTCTCCCATATATGGGTTTTGTGATGCCTCCTTTGCTCCAGTCTGCACAACTAAAGCCTGATGTGACCATTACATCAGCAGATTCTGATACTGAATTTGATGAAGATGATGACAGCATTGAAACAATCACACTTGGGGATAAAAGGATAGGCATCAAGACTAGTGTCTTGGAGGAGAAGGCTACTGCATGTAACATGCTATGTTGCTATGCTGATGAGTTGAAGGAAGGATTTTTTCCATGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTTCATGAAGAAGTTAGGAAGGCAGCAGTTTCAGCAATGCCGGAACTGTTGTCCTCAGCAAAATCAGCTGTTGAGAAGGGACAATCACAAGGTCGTGATGAGACTTATGTAAAACAGTTGTCTGATTATATAATACCAAATTTGGTGGAGGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCTAGCATGTTGGACGCATTGAATGAATGCATACAGGTCTCTGGACCACATCTAGAAGAAAAGCAAGTACGGAGCATTGTTGATGAGATTAAACAAGTCCTTACAGCCAGTTCATCAAGAAAACATGAAAGAGCAGAGAGGGCTAAAGAAGAGGACTTCGATGCTGAAGAAAGAGAACTACTCAAGGAAGAAAATGAGCTAGAAGAGGAACTTTTTGATCAAATTGGTGATTGCTTGGGGACTTTGATAAAAACATTCAGGGCATCTTTCTTGCCTTTCTTTGAGGAGTTGTCCTCATACCTAACACCTATGTTTGGAAAAGATAAAACCTCAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACTGTCGTGAAGCCGCTCTTAAATATTATGATTCTTACCTTCCATTTTTACTTGAAGCCTGCAATGATGAATATCCAGATGTTCGACAGGCTGCTGTTTATGGTGTTGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGTAGAGGCACTTTCAAGGTTAGATGCTGTGATAAGGCATCCAAATGCACAACATTCTGATAACATAATGGCATATGACAATGCCGTTTCAGCTCTTGGAAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAACACAGGTTGTTCCTGCCTGGCTAAATTGCTTGCCTATAAAAGGTGACGTAATTGAGGCTAAGGTTGTGCATGACCAACTCTGTTCAATGGTTGAAAGGTCAGATAGAGAACTTATAGGTCCCAACAATCAATATCTTCCCAAAATTGTTGCAGTGTTTGCCGAGATTTTGTGTGCCGGAAATGATCTGGCAACTGAACAAACGGTCAGTCGGATGATTAATTTATTGAGGCAGCTTCAACAGACTCTGCCACCTTCTACCCTTGCTTCAACCTGGTCATCCTTGCAGCCTCAGCAACAGCTTGCACTTCAGTCCATCCTATCATCCTAG 3354 0.4922 MATDRRQSEAQVALILGPDSSHLESLISHLMSSSNEERSQAESLFNLCKQTHPESLLMGLAHLLHSSPNPETRTMSAILLRRHLTRHHDAFLWPLLSPSARSTLHSLLLSSLHKEPLKSIAKKLCDTVSELAAAILPEDAAAWPDLLPLLFQWVTSPEARLQEISLLVFAQLAHYIGQTLLPQLSTLHSVFLRCLHSSTPSDVRIAALAASINFVQCLSSPSDRDRFQDLLPLMMQTLTEALNSGQEAVAQEALELLIELAGTEPRFLRRQIADVVGAMLQVAEAEALEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVRKLFGVLMNLLLDIEDDPAWHAAVDEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTFLAAPEWQKHHAALIALAQIAEGCSKVMIKNLEQVLSMILNSFHNPHPRVRWAAINAVGQLSTDLGPDLQVKFHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQVQFQKYYDAVMPYLKAILVNANDKSNRMLRAKAMECISLVGMAVGKDKFREDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDTEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAVEKGQSQGRDETYVKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLEEKQVRSIVDEIKQVLTASSSRKHERAERAKEEDFDAEERELLKEENELEEELFDQIGDCLGTLIKTFRASFLPFFEELSSYLTPMFGKDKTSEERRIAICIFDDVAEHCREAALKYYDSYLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVVEALSRLDAVIRHPNAQHSDNIMAYDNAVSALGKICQFHRDSINATQVVPAWLNCLPIKGDVIEAKVVHDQLCSMVERSDRELIGPNNQYLPKIVAVFAEILCAGNDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLQPQQQLALQSILSS 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00646 1117 SMART TOG_3 370 618 IPR034085 -
Cca07g00646 1117 Coils Coil 832 856 - -
Cca07g00646 1117 PANTHER IMPORTIN BETA 14 1116 IPR040122 GO:0006606
Cca07g00646 1117 Pfam HEAT repeat 926 953 IPR000357 GO:0005515
Cca07g00646 1117 PANTHER BNAC09G37860D PROTEIN 14 1116 - -
Cca07g00646 1117 Pfam Importin repeat 6 786 889 IPR041389 -
Cca07g00646 1117 Gene3D - 19 1116 IPR011989 -
Cca07g00646 1117 Pfam HEAT repeats 387 486 - -
Cca07g00646 1117 Pfam Importin repeat 287 378 IPR041653 -
Cca07g00646 1117 SUPERFAMILY ARM repeat 22 956 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00646 Cca-Chr7 9401449 9411902 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00646 K20222 - gmx:100797431 1963.73