Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00645 ATGGTTCGTTCTTCTTCCTTGCTCCACTACTACTCCCAACGCCGTGTCGCATCTTCTCTCAGGGGCTTCTTCTTCATCCCCACAACCTTAGCTCTCTTCACCTCTCTTTTTATCCTCTTCCACATTTACTCCACTTCCAACCTCTTCACCCATTATTCCACTCATTTCAAATCATCCTCTCCCTTTTTCACCACCCCTTCTACTCCCACACCTCACTTCGTCCCTTTCTTCCACAACAATGCTTCCGACTCCGCCAAATCTCCGACTTTTCAACTGGGGTATGACCTCAGATCACAGAGTCAACGGGGTCTGCCACTGCCACCGCGATTCAGCTCAAAGGGAGAATTTGAGAATAACAACGACTTGTTCCATGATAGAGATATATTTATGGAAGACTATAAAGAAATGAATAGGAGCTTAAAGATATATGTTTATCCTCATAGGACTGATGATCCTTTTGCAAACGTGCTTTTGCCTGTGGAATCTGAACCTGGTGGCAATTATGCCAGTGAAAGTTACTTCAAAAAGGTTCTTATGAAGAGCCATTTCATTACAAAAGACCCAACAGAAGCAAATCTATTCTTTCTCCCCTTTTCCATAGCAAGATTACGGCACGACCGTAGAGTTGGTGTGAGAGGCATACAAGACTTCATTAGAGACTACATTCAGAATATCAGTCACAAGTATCCATATTGGAACCGCACAGGTGGTGCTGATCACTTTTATGTTGCATGTCATTCAATTGGAAGGTCTGCCATGGATAAAGCACCTGATGTGAAATTCAATGCTATTCAAGTTGTATGCTCATCTAGTTATTTCCTAACTGGGTATATTGCTCACAAGGATACATGCCTACCACAAATTTGGCCAAGAAAAGGAAATCCCCCTAACCTTGTCTCATCAAAGAGGAAAAGGCTAGCTTTCTTTGCTGGAGGAGTTAATTCCCCTGTACGTGTAAAGCTTCTTGAGACATGGAAAAATGATTCAGAAATCTTTGTTCACCATGGACGGCTTAAAACACCATACGCAGATGAATTGCTAGGAAGCAAGTTCTGCCTTCACGTTAAGGGCTTTGAAGTGAACACAGCTCGCATCGGAGATTCTCTATATTATGGCTGCGTTCCTGTGATCATTGCCAACTACTATGACCTTCCATTTGCTGATGTGCTAAACTGGAAGAGCTTTTCAGTTGTTGTCACTACCTTAGATATTCCTTTACTGAAAAAGATCCTCAAGGATATCATCAATTCTAATAAATATATGATGTTACAAAGCAATGTTATGAAGGCGAGGAAACACTTCCAATGGCATTCACCCCCGCTCGACTTTGATGCATTTTACATGGTTGTGTATGAACTATGGCTTAGACGAAGTTCTATAAGAAATTCTTTGGGGGATTCTTTGAGAGTTTAA 1413 0.4176 MVRSSSLLHYYSQRRVASSLRGFFFIPTTLALFTSLFILFHIYSTSNLFTHYSTHFKSSSPFFTTPSTPTPHFVPFFHNNASDSAKSPTFQLGYDLRSQSQRGLPLPPRFSSKGEFENNNDLFHDRDIFMEDYKEMNRSLKIYVYPHRTDDPFANVLLPVESEPGGNYASESYFKKVLMKSHFITKDPTEANLFFLPFSIARLRHDRRVGVRGIQDFIRDYIQNISHKYPYWNRTGGADHFYVACHSIGRSAMDKAPDVKFNAIQVVCSSSYFLTGYIAHKDTCLPQIWPRKGNPPNLVSSKRKRLAFFAGGVNSPVRVKLLETWKNDSEIFVHHGRLKTPYADELLGSKFCLHVKGFEVNTARIGDSLYYGCVPVIIANYYDLPFADVLNWKSFSVVVTTLDIPLLKKILKDIINSNKYMMLQSNVMKARKHFQWHSPPLDFDAFYMVVYELWLRRSSIRNSLGDSLRV 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00645 470 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 107 462 IPR004263 GO:0006486|GO:0016757
Cca07g00645 470 Pfam Exostosin family 137 413 IPR040911 -
Cca07g00645 470 PANTHER EXOSTOSIN-LIKE PROTEIN-RELATED 107 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00645 Cca-Chr7 9386670 9390034 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00645 - - gmx:100798319 804.283