Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00638 ATGAAGTACAAAGACCCTAAACGGTCAATTGATAGTAGGGTTGAGGATCTTATTAGCCGAATGACTCTTGAGGAGAAAATTGGCCAAATGTTGCAGATTGAGCGCAAGTATGCATCTGCTGATTTGGTTAAGAAATATTTTATTGGGAGTGTAATGAGTGAGGGAGGAAGTATACCAGCTCCACAAGCTTCTGCTGAAGCCTGGATTGACATGGTGAATGAGTTTCAGAAGGGTGCTTTGTCAACTCGGCTTGGAATTCCAATATTTTATGGGATTGATGCCGTTCATGGCCACAGCCCTGTTTACAACGCAACTATTTTTCCTCACAACATTGGTCTTGGAGCTACCAGGGACCCTGAACTAGTCAAGAGAATTGGAGCTGCAACTGCCCTTGAAGTTAGAGCAACAGGAATCCAATATGTTTATGCACCTTGCATAGCAGTCTGTAGGGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATCCTAATCTTGTTCAAGCTATGACTGAAATCATACCAGGATTGCAAGGGGACATCCCTGATAATTTACCAAAGGGTGTCCCTTTTCTCACCGGGAAAGAAAAGGTAATAGGTTGTGCTAAGCACTACGTGGGTGATGGTGGAACAATCAATGGGATTGATGAGCACAACACTGTTATAGATAGAGATGAATTGATGAGAATTCACATGCCAGGCTACATCAGCTCAATCAGCAAGGGTGTGGCAACCATTATGGTCTCTTACTCCAGTTGGAATGGAGTAAAAATGCATGCTCACCACGATCTTATTACTGGCTTCCTCAAGAATACTCTCAATTTCAAGGGCTTAGTAATTTCTGATTTTGAGGGTCTTGATAGGATCACCTTTCCTCCTCATGCAAACATCACTTATTCAATTGAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGGTTCCAAAGCTTTACACAGAATTCATAGATGATCTAACCATGTTGGTGAAAAATGAGTACATTCCCATGAGTCGAATTGATGATGCGGTGAGAAGAATTTTGTGGGTTAAGTTCATGATGGGTATTTTTGAGAACCCTTTTGCTGATAACAGTTTGGCCAAATATGTGGGAATCCAGGAGCACAGAATTTTGGCTAGGGAAGCAGTAAGGAAATCAATGGTCCTTCTAAAAAATGGTGAATCTGTTGATAAGCCTTTGTTGCCTCTTCCTAAAAAGGTGCCAAAAATACTTGTGACTGGAAGCCATGCAGATAATCTAGGATATCAGTGTGGTGGCTGGACCATAGAATGGCAAGGAGTCAGTGGGAACAATCTTCTCAAAGGGACTACAATTCTCAGTGCTGTGAAAAACACTGTTGATCCTGAAACCACAGTTGTCTACAAGGAGAACCCTGATGTAGAATTTGTTAAATCAAATGGATTTACCTATGCCTTAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGCATGGTGACAGCACGAACTTGACAATCCCAGACCCTGGTCCTGAGACCATAACAAATGTGTGTGGAGCAATAGAATGTGTGGTCGTCATTATTTCTGGTCGTCCTGTAGTTATTGAACCATATGTTGGTTTAATAGATGCACTTGTTGCTGCTTGGCTCCCAGGTAGTGAAGGCCAAGGTGTGGCTGATGTTTTATATGGTGACTATGGTTTCACCGGAAAGCTTCCAAGGACATGGTTCAAAACTGTTGATCAACTTCCAATGAATGTTGGAGATCCTCACTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTACCAAACCTACAACTAAGGGCTTTTACTCTTCGTAG 1824 0.4243 MKYKDPKRSIDSRVEDLISRMTLEEKIGQMLQIERKYASADLVKKYFIGSVMSEGGSIPAPQASAEAWIDMVNEFQKGALSTRLGIPIFYGIDAVHGHSPVYNATIFPHNIGLGATRDPELVKRIGAATALEVRATGIQYVYAPCIAVCRDPRWGRCYESYSEDPNLVQAMTEIIPGLQGDIPDNLPKGVPFLTGKEKVIGCAKHYVGDGGTINGIDEHNTVIDRDELMRIHMPGYISSISKGVATIMVSYSSWNGVKMHAHHDLITGFLKNTLNFKGLVISDFEGLDRITFPPHANITYSIEAGVSAGIDMFMVPKLYTEFIDDLTMLVKNEYIPMSRIDDAVRRILWVKFMMGIFENPFADNSLAKYVGIQEHRILAREAVRKSMVLLKNGESVDKPLLPLPKKVPKILVTGSHADNLGYQCGGWTIEWQGVSGNNLLKGTTILSAVKNTVDPETTVVYKENPDVEFVKSNGFTYALVVVGEHPYAEMHGDSTNLTIPDPGPETITNVCGAIECVVVIISGRPVVIEPYVGLIDALVAAWLPGSEGQGVADVLYGDYGFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGLSTKPTTKGFYSS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00638 607 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 387 596 IPR036881 GO:0004553|GO:0005975
Cca07g00638 607 Pfam Glycosyl hydrolase family 3 N terminal domain 22 348 IPR001764 GO:0004553|GO:0005975
Cca07g00638 607 SUPERFAMILY (Trans)glycosidases 2 386 IPR017853 -
Cca07g00638 607 Gene3D - 372 598 IPR036881 GO:0004553|GO:0005975
Cca07g00638 607 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 606 - -
Cca07g00638 607 Gene3D - 1 371 IPR036962 GO:0004553|GO:0005975
Cca07g00638 607 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 1 606 - -
Cca07g00638 607 Pfam Glycosyl hydrolase family 3 C-terminal domain 387 596 IPR002772 GO:0004553|GO:0005975
Cca07g00638 607 PRINTS Glycosyl hydrolase family 3 signature 83 99 IPR001764 GO:0004553|GO:0005975
Cca07g00638 607 PRINTS Glycosyl hydrolase family 3 signature 107 126 IPR001764 GO:0004553|GO:0005975
Cca07g00638 607 PRINTS Glycosyl hydrolase family 3 signature 153 169 IPR001764 GO:0004553|GO:0005975
Cca07g00638 607 PRINTS Glycosyl hydrolase family 3 signature 269 287 IPR001764 GO:0004553|GO:0005975
Cca07g00638 607 PRINTS Glycosyl hydrolase family 3 signature 199 215 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00638 Cca-Chr7 9276757 9280441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00638 1 599 Glycoside Hydrolase AT5G20950 70.952 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00638 K05349 - gmx:100800077 1118.22