Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00634 ATGTCTGTTGAATCCTCATCCACCTCCGTGGCCGTCACAGATGGACAATCCAAGAATTTCAGGAAGCCCAAATATTCTAGATTCTCACAGCAAGAACTTGATGCCTGGCAACCAATTCTAACACCTAGTTGGGCCATTTCAATATTTACTGTTATAGGACTCATCTTCATTCCTGTTGGTCTTGCTTCATTGTTTGCATCAGAGAGTGTGGTGGAAGTGCCATTTCGATATGATGATGAATGCCTTCCACCTGATTACAAAGATGATGCACTGGAATATATTCAAAACGACAACATAAACAAAACTTGCACCAGGAACTTGACTATTAAGAATAAAATGAAGGCCCCTATTTATGTCTATTATCAGCTTGGTAACTTTTACCAAAACCATCGCCGATACGTTAAAAGTAGAGATGATAAACAACTGAGGAATAAAGCATCAGAGAATGATGTAGGCTCATGCAGTCCTGAAGACTATACATCAACTGAATTGGGCCATAAACCAATTGTCCCTTGTGGCATTATTGCATGGAGCCTTTTTAATGACACATACAGAATTTCAAGCAATAACAAAGATTTGGTGATCAACAAAAAGAACATAGCATGGAAGAGTGACCAATTGGCGAAATTTGGGTCCGATGTTTATCCTAAGAATTTTCAGATTGGAGGTTTGATTGGGGGAGCTAGACTTAATGAGAGCATACCTGTAAGTAAATATATCTCCATTGCCGTATATTAA 738 0.3875 MSVESSSTSVAVTDGQSKNFRKPKYSRFSQQELDAWQPILTPSWAISIFTVIGLIFIPVGLASLFASESVVEVPFRYDDECLPPDYKDDALEYIQNDNINKTCTRNLTIKNKMKAPIYVYYQLGNFYQNHRRYVKSRDDKQLRNKASENDVGSCSPEDYTSTELGHKPIVPCGIIAWSLFNDTYRISSNNKDLVINKKNIAWKSDQLAKFGSDVYPKNFQIGGLIGGARLNESIPVSKYISIAVY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00634 245 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 64 215 IPR005045 GO:0016020
Cca07g00634 245 PANTHER ALA-INTERACTING SUBUNIT 17 242 - -
Cca07g00634 245 PIRSF Lem3/Cdc50 2 244 IPR005045 GO:0016020
Cca07g00634 245 PANTHER CELL CYCLE CONTROL PROTEIN 50 17 242 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00634 Cca-Chr7 9177506 9181079 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00634 - - gmx:100779539 421.779