Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00633 ATGGAATTTTCCAAGCATGCCAATGCAGCTGATCGCTCTTATGAGGATTTTGATCCTTTGTTTGTGTGGCGTAGAGAAGAGGCCCGTGACACCCTTGAACTTCACCTTCCAGGTTTTAGGAGAGATCAAATACGAATTCAGATCAACCATGTTGGTTATTTGGTAATAAGCGGGGAGCGACATATGGATGGAAGTAGATGGAAACGTTTCAGGAAAGAATTTGAAATCCCATCATATTGCAATGACGATGCAATTCATGGCAATATGATGCAGAGCATTCTTTCGGTGGTGATGCCAAAGAAAAGTCGTCTAACTCATCAAGAGGAGCAAGAACTGGTGACAGAGAAAAGGGAAAATTACAAAGAAGAGACTGAAACCACAACCAAAGAGGGAATAATAGCAGAAGATATGGCTCATGAGTTTGAAGAACATGATAATGTGAGGTTACCACAAGATACTACTAGAGACGTTGCCCTCAAATTCATGCTTGTGATGGTTCTGATATTGGTCATTGCAAGTTATGTAGCAGACATAAGCAAAAGCCTCATGGCTCAAGGTGCTTCATATTTTCACAATTAG 579 0.4093 MEFSKHANAADRSYEDFDPLFVWRREEARDTLELHLPGFRRDQIRIQINHVGYLVISGERHMDGSRWKRFRKEFEIPSYCNDDAIHGNMMQSILSVVMPKKSRLTHQEEQELVTEKRENYKEETETTTKEGIIAEDMAHEFEEHDNVRLPQDTTRDVALKFMLVMVLILVIASYVADISKSLMAQGASYFHN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00633 192 Gene3D - 2 107 IPR008978 -
Cca07g00633 192 Pfam Hsp20/alpha crystallin family 25 109 IPR002068 -
Cca07g00633 192 SUPERFAMILY HSP20-like chaperones 14 104 IPR008978 -
Cca07g00633 192 MobiDBLite consensus disorder prediction 106 127 - -
Cca07g00633 192 CDD ACD_sHsps-like 31 100 - -
Cca07g00633 192 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 12 115 IPR002068 -
Cca07g00633 192 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 1 190 - -
Cca07g00633 192 PANTHER HEAT SHOCK PROTEIN 26 1 190 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00633 Cca-Chr7 9145572 9146701 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00633 - - ccaj:109795537 367.466