Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00630 ATGGAGAAACAAACCACCGAGAAATCACGTCGGGAACGAAGGAAAGAATCCCGCTTGGCGAAGAATGCATCAAAACACCAATCCTGGCTCCTCCATCACAAATCTCGAGCTACGAAAAAATGTGGCAATAATTCAGAGCTAGAAACTAAAAGCAAATCCGACACATCACGTAGTCCTAGTCCCAAGGAAACACAAGTTCAGAAGTTAGAATCTAACTCTAGGAAACATGAGACAGCTGAAGAACACACTGTGTCAGAGGAAATTCGTGTCACTGGTGCAAAGAAAATTAAGAGAATGAAAAAGGGTTCTAACAAGAGTTCCGCAAAGAGTATGGTGGAGATGGTGATGCAGGATGTTTCTGCTGCTGCTGAAAAGGATCTAGAGCTGGAAAGGAAGCTTTCCAAGAAGCTCAAGGTGAAGGTAGGAAAATTGAGGGGGTTGGATGATGGGCTGAACATATTACTCGAAGGAATGTCGTCTGCTTTTGATTTCATGGGAGAAGAGGAGGTTTCTGGTAGTGGTGAATTGTCTGTGAAGAGATTGAAGAAGAGCTCGTCGAGTAAGAAGGATAAATTGTCAAAGAAAAGGGTCAAAGCGGAAGTGAGGGACGATGTATTGGGGCATGTAGAAGCTTCTAATCGAGAGGTAGAAACTGATGATGTTCCTGAAAGTGTGCCTTTAAAAAAGAAGCATAAGAAAAGGAAATTGTCGGGTCAACCGCAGGAAGACAATGTGGAGGATGAAGCTGTTGGCATGTCCAGCCCTGTGGAATCTTGTGGAATGGAGGAGAATTTGGAGGATGCTCCTGCTGAAGTTCCGGAAAAGAAAGCCAAAGAAAAATATATAGCGCCTCATTTGAGAGCTCGTGCTGGCAATGAACCTGAAGAGCATACTCAAATTCGTAGACGTATACGAGGCCTTCTTAACAGGCTTTCTGAATCCAATGTTGAGTCAATAACTGGGGAATTGTCCTTGATCTTTCAGACTGTAGCTCGTAGTGTTGCTTCACAGATCTTGACCCAGGAAATTTTGGCATCATGTTCTGGTGGCCCCCGTGGCAATCAACAGTATGCTGCTGTTTTCGCTGCATTCGTTGCTGGGATGGCATGTTTGGTCGGTGTTGACTTCAGTGCAAGGTTTATGGCTTCCTTTGCAAAATGCTTTGAGGATGAGTACAATAAAGAAGACAATCTCTCCTTGCGGAATCTTACTCTTCTCTTATCCTATTTATGCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTCTAGACATGCTGAGCAAGCGTTTAACTGAGATGGATGTCTCTATCATTCTGGCATTATTACAATGTTGTGGTATGAAAATAAGGGCTGATGATCCATCTTCCATGAAAAATTTCATTCTTAGTGTTCAGAATACATCAAATAAGTTGAAGGCTTCCTATGGAGATGACAATGAAAAGAAAAACAGTAAAAGAATGGATTTCATGCTTGAAATCATATGTGACATCAAGAACAACAAAAGAAAGCAAAATGAGGACACTGCACATCAAACGCGGATTAAGAAGTGGTTACAGAAGTTAAGAGTTGATGACATTTTGATTAGAGGTCTTAAATGGAGCAAGTTACTTGATCCTGACAAGAAGGGACAATGGTGGTTGTCTGGAGATTTGGCTTCTGCAACAGATAATGTTGAAGAAGTTGCCAACAGAATAGACAAAGATATTCTTGAAACCCAACGAATGCTGCAGCTCGCTGCTGCTCAAAAGATGAACACAGATGCCAGAAGGGCAATCTTTTGTATTATAATGAGCGGGGAGGATTATATTGATGCATTTGAGAAGCTTTTAAGATTGGAATTGCCAGGCAAGCAGGATAGAGATATCATGCGGGTTCTTGTAGAGTGTTGCTTGCAAGAGAAAGTTTTCAACAAGTATTATACAGTGCTGGCTTCTAAGTTGTGCGAGCATGACAAAAATCACAAGTTCACTCTACAGTTTTGCCTGTGGGACCAGTTTAAGGAGCTGGAGTCAATGCCACTTATGAGGTCAATGCACCTGGCAAAATTTGTTGCTGAAATGGTTGCCTCATTCACTCTCTCCCTTGCTCTTTTGAAGACTCTGGATCTGAATGATATCACCTTATTAACACCAAAAAGGATTATGCATTTCCGCATTCTGTTTGAGGCCATTTTTGAGTATCCTGAAAACTTGGTATGGAATATTTTCACACGTGCAGCAGTGACCCCTGAACTTGAAAGTCTTAGGCAAGGCCTTGAATTTTTCATAAGGGAGTACGTTGTGAAAACCAATAAAGATCTAACTCAAAATTTTAAGTTAGCAAAAAGAGCCCTTAATAATGTGGAAGGAGTTTTGATGTGA 2367 0.4128 MEKQTTEKSRRERRKESRLAKNASKHQSWLLHHKSRATKKCGNNSELETKSKSDTSRSPSPKETQVQKLESNSRKHETAEEHTVSEEIRVTGAKKIKRMKKGSNKSSAKSMVEMVMQDVSAAAEKDLELERKLSKKLKVKVGKLRGLDDGLNILLEGMSSAFDFMGEEEVSGSGELSVKRLKKSSSSKKDKLSKKRVKAEVRDDVLGHVEASNREVETDDVPESVPLKKKHKKRKLSGQPQEDNVEDEAVGMSSPVESCGMEENLEDAPAEVPEKKAKEKYIAPHLRARAGNEPEEHTQIRRRIRGLLNRLSESNVESITGELSLIFQTVARSVASQILTQEILASCSGGPRGNQQYAAVFAAFVAGMACLVGVDFSARFMASFAKCFEDEYNKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLDMLSKRLTEMDVSIILALLQCCGMKIRADDPSSMKNFILSVQNTSNKLKASYGDDNEKKNSKRMDFMLEIICDIKNNKRKQNEDTAHQTRIKKWLQKLRVDDILIRGLKWSKLLDPDKKGQWWLSGDLASATDNVEEVANRIDKDILETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDQFKELESMPLMRSMHLAKFVAEMVASFTLSLALLKTLDLNDITLLTPKRIMHFRILFEAIFEYPENLVWNIFTRAAVTPELESLRQGLEFFIREYVVKTNKDLTQNFKLAKRALNNVEGVLM 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00630 788 MobiDBLite consensus disorder prediction 39 57 - -
Cca07g00630 788 Gene3D - 268 544 - -
Cca07g00630 788 SMART if4_15 301 503 IPR003890 GO:0003723|GO:0005515
Cca07g00630 788 SMART ma3_7 590 696 IPR003891 -
Cca07g00630 788 MobiDBLite consensus disorder prediction 1 87 - -
Cca07g00630 788 MobiDBLite consensus disorder prediction 68 87 - -
Cca07g00630 788 Pfam MA3 domain 591 692 IPR003891 -
Cca07g00630 788 Pfam MIF4G domain 302 503 IPR003890 GO:0003723|GO:0005515
Cca07g00630 788 ProSiteProfiles MI domain profile. 589 705 IPR003891 -
Cca07g00630 788 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 1 786 - -
Cca07g00630 788 SUPERFAMILY ARM repeat 294 505 IPR016024 -
Cca07g00630 788 MobiDBLite consensus disorder prediction 193 227 - -
Cca07g00630 788 MobiDBLite consensus disorder prediction 1 22 - -
Cca07g00630 788 MobiDBLite consensus disorder prediction 168 250 - -
Cca07g00630 788 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 1 786 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00630 K17583 - gmx:100778579 1228.39