Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00621 ATGATGCAAAAACTAAACTTGAGAAGGGTCATTGCCAAGAAAAGGAAGCAATTTCCTAGAAGGGTTAGGAGACCTGTGCTGAGTGTTTCAAACACACTTCAGCAGCTATCTGATTCATGCAGAGAAGCTTTCAAAGGTCCCGGCACTGTTCCTTCCCCACAAGATGTTCAGAGACTGCGCCACATCCTTGATAATATGAAGCCAGAAGATGTGGGACTTAGTAGAGATCTGCAGTTCTTCAAGCCTGGAAATATTACCAAAGAGAATCAAAGGGTCACTTATACAACCGTGTGCAAGTGTGACAATTTCTCACTCTGCATCTTTTTCATACCTGAAGGAGGAGTTATTCCTCTTCATAACCATCCAGGAATGACTGTTTTAAGCAAGCTTCTATTGGGACTAATGCACATTAAATCCTACGATTGGGTTGATCCTGAGACCTCTAACAATTTATTGCAACAACCATCTCAATTGAGATTGGCAAAGTTAAAAGCTGATAAGGTGTTCACAGCATCATGTGATGCTTCTGTGCTGTATCCAACAACAGGAGGGAACATCCATGAATTCACAGCCATAACCCCATGTGCTGTGCTTGATGTCATTGGTCCTCCTTATTCCAAAGAAGATGGTCGAGACTGTTCTTACTACAGAGATCACCCTTATGCTTCTTTTCCTAACGAAAGGACTGGTGAGGCAAAAGAGGAAAATGATAGTTACGCGTGGCTGGAAGAAATTGAGATGCCAGAGAAGTCTAAAATGGATGGCATCGAGTACTTGGGTCCAACTCCAACACCCTTTTAG 801 0.427 MMQKLNLRRVIAKKRKQFPRRVRRPVLSVSNTLQQLSDSCREAFKGPGTVPSPQDVQRLRHILDNMKPEDVGLSRDLQFFKPGNITKENQRVTYTTVCKCDNFSLCIFFIPEGGVIPLHNHPGMTVLSKLLLGLMHIKSYDWVDPETSNNLLQQPSQLRLAKLKADKVFTASCDASVLYPTTGGNIHEFTAITPCAVLDVIGPPYSKEDGRDCSYYRDHPYASFPNERTGEAKEENDSYAWLEEIEMPEKSKMDGIEYLGPTPTPF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00621 266 Pfam PCO_ADO 62 262 IPR012864 GO:0016702
Cca07g00621 266 Gene3D Jelly Rolls 25 236 IPR014710 -
Cca07g00621 266 SUPERFAMILY RmlC-like cupins 30 220 IPR011051 -
Cca07g00621 266 CDD cupin_ADO 101 206 - -
Cca07g00621 266 PANTHER UNCHARACTERIZED 22 262 IPR012864 GO:0016702
Cca07g00621 266 PANTHER CYSTEINE OXYGENASE/2-AMINOETHANETHIOL DIOXYGENASE, RMLC-LIKE JELLY ROLL FOLD PROTEIN-RELATED 22 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00621 Cca-Chr7 8936809 8939622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00621 K23953 - gmx:100805411 463.381