Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00620 ATGAAGGTGGTGGCACTCGTAAGCGGCGGCAAAGACAGTTGCTATGCCATGATGAAGGCTATTCACTATGGCCACCAGATTGTTGCATTGGCCAATTTGATGCCACTTGATGATTCTGTGGACGAGCTCGATAGTTACATGTATCAAACTGTCGGGCATCAAATTATCGTCAGCTATGCTGAATGCATGGGATTGCCATTGTTCAGGAGGCGAATACAAGGATCCTCAAGGCATCAGGAGCTTGGTTACAAAGCAACTCAAGGTGATGAAGTCGAAGACCTGTTCATTTTGTTACGTGAAGTGAAAAGGCAGATACCCTCAGTTGGTGCAGTGTCTTCTGGAGCCATCGCATCTGACTATCAGAGATTGCGGGTGGAAAGTGTTTGTTCAAGGTTAGGCCTTGTTTCTCTGGCATACTTATGGAAACAAGATCAGTCATTGCTTCTCCAGGAAATGATTACAAATGGGATTGTAGCTGTAACTGTGAAGGTAGCTGCTATGGGTTTGGATCCTGCAAAGCACTTGGGTAAAGAATTAGCCTTCTTAAATGCTTATTTACATAAATTGAAAGAATTATATGGAATCAATGTTTGTGGTGAAGGAGGGGAATATGAAACATTAACTCTTGATTGCCCGCTCTTTTCTAATGCTCACATCGTGCTTGATGAATATCAAGTTGTGATGCACTCTTCGGATTCCATAGCTCCTGTTGGAATCCTTCATCCCTTGGCATTTCATTTGGAAAATAAGGCAGATGTTCAGTATTTAAAATCACAAGAGAAAATACATGAGATTTATACGCAAAACCTCGGATCTGTGTTTGAAGTGCAAGACAGCCTAGAAGGATGTGAGACCACATGCAAGCCAGTGGGTTATAGAGCTGGCCCAGCTGATAGCATAGAACATACATTTAACATCTCAAGAACAAATAACACGGGCACATTCTCTATATGTTGCTGGCTGCAAGACTCATGCAATGGTTTGCAGGAAGATTTGAAGATTGTTTTGGGGAAAATTGAATCAAAGTTATCTGGCCTTGGTTTTGGCTGGGAGAATGTCCTCTATATTCACCTTTACATTGATGACATGAATAAGTTCTCTGAGGCTAACGAAACATATGTGAAGTTTATAACACAGGATAAATGCCCATTTGGTGTCCCTTCTCGTAGTACTGTTGAAATGCCTCTAGTAGAAATGGGTTTAAGCAGAGCATACATTGAAGTTCTGGTAGCCGACAATAAAGAGAAAAAGGTTTTGCATGTGCAGAGTATTTCCTGTTGGGCGCCTAGTTGCATTGGGCCATACAGCCAGGCAACCTTGCATAAGGGTATACTTCACATGGCTGGTCAATTGGGGCTTGACCCTCCTACAATGAATCTTTGCAAGGGAGGCCCTGGTGTTGAACTGAAACAAGCACTAGAAAACAGTGAAGCGGTGGCAAAATGCTTTAATTGTTCAATATCTACATCTGCTATTGCTTTTGTTATTTACTGCTCTAAACGTATTTCATCATTGGAGAGTCTTGATATTCAGGAGAAACAAGAAACAATCCTTAGGCAGATGAAGATCTCCCATTTACAGGAAGGAGACACTATCAGAGCCTTAGATCCCTTGTTCCTTTATGTTCTTGTTCCTGATCTTCCAAAAAGAGCATGTGTAGAAGTAAAGCCTATTCTTTATGTTGAGGACGGCACAGATGAAGAATTCGAGACCATAGCAGAAAGATCTTGTTCAAAGCCACCACCATTTTATTGGGGTTTTAAGCAGGAAAATTGGCACGATTCTTGCATTCAGAAATGTGTGATTTCTGGAAAGATATGTGCCATTATACTGTCTATTACAAGTGAGCTGGTTGCGAAGATATGTTTTGACTCTGTGCCTGCTGATTATGTGAATAATGATCAATATTCTATCGCTAAGGCACATATAGAAAAGATATCGAAGTTCTGCATTTATCTTCTTGACCAAATTATGACTGATAATGACTTTACCTGGGAAGATATAATGGTTCGTATATTTCTTAAACTTTCATATACCAGATTAATTTTATTCCTCCGTTGTCTGGATTATATTTTAGTTATGCATTCTTTTCAAAACTCATTTCCTGTTTTCTGTACAATTGTCATCAATCACTGCGATTCTGGAGTGTCCTGGCTTCCTCAAACCTCTTGGGGTGGGAGATGA 2184 0.4057 MKVVALVSGGKDSCYAMMKAIHYGHQIVALANLMPLDDSVDELDSYMYQTVGHQIIVSYAECMGLPLFRRRIQGSSRHQELGYKATQGDEVEDLFILLREVKRQIPSVGAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLQEMITNGIVAVTVKVAAMGLDPAKHLGKELAFLNAYLHKLKELYGINVCGEGGEYETLTLDCPLFSNAHIVLDEYQVVMHSSDSIAPVGILHPLAFHLENKADVQYLKSQEKIHEIYTQNLGSVFEVQDSLEGCETTCKPVGYRAGPADSIEHTFNISRTNNTGTFSICCWLQDSCNGLQEDLKIVLGKIESKLSGLGFGWENVLYIHLYIDDMNKFSEANETYVKFITQDKCPFGVPSRSTVEMPLVEMGLSRAYIEVLVADNKEKKVLHVQSISCWAPSCIGPYSQATLHKGILHMAGQLGLDPPTMNLCKGGPGVELKQALENSEAVAKCFNCSISTSAIAFVIYCSKRISSLESLDIQEKQETILRQMKISHLQEGDTIRALDPLFLYVLVPDLPKRACVEVKPILYVEDGTDEEFETIAERSCSKPPPFYWGFKQENWHDSCIQKCVISGKICAIILSITSELVAKICFDSVPADYVNNDQYSIAKAHIEKISKFCIYLLDQIMTDNDFTWEDIMVRIFLKLSYTRLILFLRCLDYILVMHSFQNSFPVFCTIVINHCDSGVSWLPQTSWGGR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00620 727 Gene3D - 300 413 IPR035959 -
Cca07g00620 727 Pfam Endoribonuclease L-PSP 329 398 IPR006175 -
Cca07g00620 727 Pfam Endoribonuclease L-PSP 428 499 IPR006175 -
Cca07g00620 727 SUPERFAMILY YjgF-like 325 398 IPR035959 -
Cca07g00620 727 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 669 IPR030662 -
Cca07g00620 727 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
Cca07g00620 727 TIGRFAM MJ0570_dom: MJ0570-related uncharacterized domain 1 231 IPR002761 -
Cca07g00620 727 CDD eu_AANH_C_2 435 559 - -
Cca07g00620 727 Gene3D - 160 256 - -
Cca07g00620 727 SUPERFAMILY YjgF-like 417 564 IPR035959 -
Cca07g00620 727 Gene3D HUPs 1 157 IPR014729 -
Cca07g00620 727 Pfam Diphthamide synthase 1 227 IPR002761 -
Cca07g00620 727 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
Cca07g00620 727 Gene3D - 414 561 IPR035959 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00620 K06927 - gmx:100807009 1209.9