Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00616 ATGGGGACTCTGACGAGTTGCAGTTTCATGCCTCTCAACTCGGAGTTCCGCTCCAACCCCGTTCGCCGCGCCTTCAGGGAGAGGATTCACTGCCACCAACTCACTCGATTGAGGGGCGCCACCTCTTTCTTCTCACGCGCGCGAGTACCCAAATGGGGCAACTTCGATAGCCTTCGGTGTTTTGCTTCCAATAACAACGACAATGACAACGACAACGTTGGCGCTGCTGGAGAGGACACTGCTGCCGACGATTCTAAGTCTAACGTTACGACAACGATGCCCGAGGAAGAGAGAGGGTTCACTTCCGAGAAATCGACGCCTCCCTCCACTTCTCACAGGTCATCTTTGTCGTCGCTAGGACCTGTGTACAACACCTTTCAAGTTGATTCTTTCAAACTTATTGAGCTCCTTGGGCCTGAGAAGGTTGATCCTGCTGATGTAAAGCTGATTAAGGATAAGCTTTTTGGGTATTCAACCTTCTGGGTGACCAAAGAGGAGCCTTTCGGAGATTTGGGGGAAGGCATTCTTTTCCTTGGGAATTTAAGGGGCAAGAGAGAGGATGTTTTTGCCAAACTTCAGAATCAGCTAGTTGAGATCACGGGTGATAAGTACAACCTTTTTATGGTGGAGGAACCCAATTCAGACAGTCCTGATCCACGTGGTGGGCCACGTGTTAGCTTTGGTTTGTTGAGGAAGGAGGTTTCTGATCCTGGACCAACGACGCTTTGGCAATATGTCATTGCATTGTTGTTGTTTCTCCTAACTATTGGTTCCTCAGTGGAGCTAGGAATTGCATCTCAGATCAACAGACTTCCCCCAGAAGTTGTGAAATACTTTACAGATCCAGATGCTATTGAAGCTCCAGATATGGAGCTGCTACTTCCATTTGTTGACTCGGCTTTACCTTTAGCATATGGTGTCTTGGGGGTTCTTCTGTTTCATGAGGTTGGACATTTTCTAGCAGCATTTCCTAAACAAGTAAAATTAAGCATCCCTTTCTTCATTCCAAACATCACACTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCTATCCTTCCTGATAGAAGTACAAAAGTAGACGTATCACTTGCGGGTCCCTTTGCTGGAGCCGTGTTATCATTTTCAATGTTTGCTGTTGGCCTTCTTCTCTCATCAAATCCAGATACAACAGGAGATTTGGTGCAAGTTCCTAGCTTGTTGTTTCAAGGTTCCTTGCTTCTTGGATTAATCAGTAGAGCAACTCTTGGTTATGCAACAATGCACGCTGCAACAGTTCCAATTCACCCTCTTGTGATTGCAGGCTGGTGTGGCTTAACCATACAAGCTTTTAACATGCTTCCAGTGGGGTGCCTTGATGGTGGAAGAGCAGTGCAGGGTGCTTTTGGAAAAAGTGCACTAGTTGGCTTTGGTTTAACCACTTACACGTTGCTTGGATTAGGAGTGCTTGGCGGACCTCTTTCACTTCCATGGGGGCTTTATGTTTTGTTATGTCAGAGGACACCGGAGAAACAGTGCTTAAATGATGTGACAGAAGTTGGAACATGGAGAAAGGCACTTGTGGCAGTTGCTATTTTTCTTGTTGTCTTGACTCTTGTTCCTGTTGGGGATGAGCTTGCAGAGGAACTGGAGATGCTGAATACCTATCCATCAATTATTTCCAATAGCATTTGA 1674 0.4612 MGTLTSCSFMPLNSEFRSNPVRRAFRERIHCHQLTRLRGATSFFSRARVPKWGNFDSLRCFASNNNDNDNDNVGAAGEDTAADDSKSNVTTTMPEEERGFTSEKSTPPSTSHRSSLSSLGPVYNTFQVDSFKLIELLGPEKVDPADVKLIKDKLFGYSTFWVTKEEPFGDLGEGILFLGNLRGKREDVFAKLQNQLVEITGDKYNLFMVEEPNSDSPDPRGGPRVSFGLLRKEVSDPGPTTLWQYVIALLLFLLTIGSSVELGIASQINRLPPEVVKYFTDPDAIEAPDMELLLPFVDSALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPNITLGSFGAITQFKSILPDRSTKVDVSLAGPFAGAVLSFSMFAVGLLLSSNPDTTGDLVQVPSLLFQGSLLLGLISRATLGYATMHAATVPIHPLVIAGWCGLTIQAFNMLPVGCLDGGRAVQGAFGKSALVGFGLTTYTLLGLGVLGGPLSLPWGLYVLLCQRTPEKQCLNDVTEVGTWRKALVAVAIFLVVLTLVPVGDELAEELEMLNTYPSIISNSI 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00616 557 MobiDBLite consensus disorder prediction 103 117 - -
Cca07g00616 557 CDD S2P-M50_like_2 249 497 - -
Cca07g00616 557 PANTHER ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED 2 544 - -
Cca07g00616 557 PANTHER ZINC METALLOPROTEASE EGY1 2 544 IPR044838 -
Cca07g00616 557 MobiDBLite consensus disorder prediction 66 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00616 Cca-Chr7 8834773 8842680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00616 K25380 - gmx:100808073 944.88