Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00613 ATGGGATCGTTCCCCtcttcccttcttcttctcttctttttcttcttcttcttcttcttctcttcgtcACTCTCCAATCCCCATGACCCTCTCACACTCAAAGGTGTTGGTATTGAAAACCCGGTTGTGGAGGTCACCCCTTCCGTGCTTTTAGGGCACTCGGATTCTCAAGGTGCTAAGGACACTTTACGATGTGAGCGTGTTCGAGTTTCGGGTAAATCCAGGCTCAAACTTGGGAGCTACGCTAATGCGTTGCATGTTACTTTGGCTCCGTCTGTTTCGATTCCGGAGAAGTTGCATAGCAGAATTCAGGTTTGTTTCCACAGGAATGATAAACTTGGATGGTGTCAGTGCAAAAAGGATGAATGGATGAGTGTGCAAAAGGGGGTCTGGAATGGTGTTATGTCACCTTATCAAACCAGATACGTTGATGTGAGGATCAGTGGAGAAATATCGGGTTCTGTTACAGTTGCTCTTGAAGAAGAATTTCAGCAATGGCGCCTCATTTGTCTTGCGGTGGGATTGATACTGCTGTTGTTGGCTCCAATTGTTAGCAGTTGGGTTCCGTTTTATTATAGCACGTCAATGGCTATAGGGATCTTTCTTGTCATTATAATCATTCTTTTTCAGGGTATGAAATTAATGCCAACTGGAAGAAAAAATATCTTATACCTTACCATATATGGATCAGTGGTTGGAGCAGGGTCATTCCTTTTGCACCAATTCTCTTTGATCTTAAATTCAATTTTTCAGAGCCTTGGGCTGAGTGAGGAGATGCACAATTCAGTTGCTGTTTTTGTAATACTGGGTATCATCTTGGCTGGAGCTGCTTTAGGCTACTGGATTGTTAGGAGGTTTGTTATTTCAAAAGAAGATGGTAGTGTGGATGCTGGGGTTGCTCAGTTTGTGAAATGGGCAATGTACATTGTCGGAACCACTTCCATTTTGCAGAGCACTCTTGATCCTCTTCTAGCAATTCCTCTTCCAGCAATTGGAGCTTTGATTTATTGTGGAGCTGCTTGCAAACTTTTTTCTGCGATAAAACTGTTTCATGGATGGTATGAAAGTTCAGGAAATGATGACTATTCGCTGCAACGGTTGAGAGGAAGACCTGGTCGGGCAGAATTTCTTAGCAAGTCAACCCCTAAAGGAAAACAATGGAAAAGCCCTAAAGGAAAATTGTGGAATAGCCCTAAAAAATCAGCATGGTCCGATTCTCCTGTGCGAGGTGTTGTATCACCATATTCTGGGATTTCGTCACAATCTTCAGGGACTCAAACAGGGCAGGATTATTATTCAACCTTCCACAAGACCCGCAACAGAAAGAAGTTCACAAAGCAAGAGTGGGATGAGTTTACAAGAGAATCCACAAAGCAGGCACTAGCAGAATGGGCAGCTTCTCCAGAATTCACTGATTGGATTGTTGAGCACGCAGATCGGATTAAAGTCCTTCCAAGTGAGAGTTCAGACGAGACAATGGGAAGTGAATCGGATTCCACGGATCTAGGAAGTGGAAGTGGATATCGGCTTTTTAATTGGCAGTGA 1545 0.422 MGSFPSSLLLLFFFFFFFFFSSSLSNPHDPLTLKGVGIENPVVEVTPSVLLGHSDSQGAKDTLRCERVRVSGKSRLKLGSYANALHVTLAPSVSIPEKLHSRIQVCFHRNDKLGWCQCKKDEWMSVQKGVWNGVMSPYQTRYVDVRISGEISGSVTVALEEEFQQWRLICLAVGLILLLLAPIVSSWVPFYYSTSMAIGIFLVIIIILFQGMKLMPTGRKNILYLTIYGSVVGAGSFLLHQFSLILNSIFQSLGLSEEMHNSVAVFVILGIILAGAALGYWIVRRFVISKEDGSVDAGVAQFVKWAMYIVGTTSILQSTLDPLLAIPLPAIGALIYCGAACKLFSAIKLFHGWYESSGNDDYSLQRLRGRPGRAEFLSKSTPKGKQWKSPKGKLWNSPKKSAWSDSPVRGVVSPYSGISSQSSGTQTGQDYYSTFHKTRNRKKFTKQEWDEFTRESTKQALAEWAASPEFTDWIVEHADRIKVLPSESSDETMGSESDSTDLGSGSGYRLFNWQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00613 514 MobiDBLite consensus disorder prediction 376 408 - -
Cca07g00613 514 MobiDBLite consensus disorder prediction 488 514 - -
Cca07g00613 514 PANTHER EXPRESSED PROTEIN 8 502 - -
Cca07g00613 514 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 8 502 - -
Cca07g00613 514 Pfam NEMP family 156 438 IPR019358 -
Cca07g00613 514 MobiDBLite consensus disorder prediction 485 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00613 Cca-Chr7 8820018 8825998 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00613 - - gmx:100808605 793.497